RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 DTX3LQ8TDB6 740 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 RSC1A1Q92681 617 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 FCRL5Q96RD9 977 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 VAT1Q99536 393 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 SLC40A1Q9NP59 571 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 WASH6PQ9NQA3 447 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 HACD3Q9P035 362 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 IL17CQ9P0M4 197 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 TMEM184BQ9Y519 407 aaPredicted RBP12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 HACD1B0YJ81 288 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 STK17BO94768 372 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 ZRANB2O95218 330 aaKnown RBP eCLIP12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 HLA-DPA1P20036 260 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 SPAM1P38567 509 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 LEPRP48357 1165 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 TMEM115Q12893 351 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 MPP3Q13368 585 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 GPR18Q14330 331 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 CHRNA6Q15825 494 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 ZDHHC20Q5W0Z9 365 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 ABRAXAS1Q6UWZ7 409 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 TIPARPQ7Z3E1 657 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 PRICKLE2Q7Z3G6 844 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 RCOR2Q8IZ40 523 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 DDHD1Q8NEL9 900 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 GDAP1Q8TB36 358 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 BLOC1S5Q8TDH9 187 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 RBM41Q96IZ5 413 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 C9orf72Q96LT7 481 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 TGM7Q96PF1 710 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 GORASP1Q9BQQ3 440 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 ZPBPQ9BS86 351 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 WDR37Q9Y2I8 494 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 PCDHA13Q9Y5I0 950 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 HECTD1Q9ULT8 2610 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 FLNCQ14315 2725 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 PTPN13Q12923 2485 aa12.78□□□□□ -0.36
HMGCS1-205ENST00000508319 GLYATL1P3A0A0U1RQE8 302 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 LOC101059948A0A1B0GTJ6 334 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 ZNF891A8MT65 544 aaPredicted RBP12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 APOC4-APOC2K7ER74 178 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 POLR1CO15160 346 aaPredicted RBP12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 TOX3O15405 576 aaPredicted RBP12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 CAPN5O15484 640 aaPredicted RBP12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 BUD23O43709 281 aaKnown RBP12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 APOC2P02655 101 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 IDSP22304 550 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 TNNT3P45378 269 aaPredicted RBP12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 CTSCP53634 463 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 NFKB2Q00653 900 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 DMPKQ09013 629 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 GTF2H3Q13889 308 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 GPRC6AQ5T6X5 926 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 BORAQ6PGQ7 559 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 PID1Q7Z2X4 250 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 RBM12BQ8IXT5 1001 aaKnown RBP12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 CCDC170Q8IYT3 715 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 UNC5BQ8IZJ1 945 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 GPR150Q8NGU9 434 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 SLC45A3Q96JT2 553 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 HEMGNQ9BXL5 484 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 TRIM5Q9C035 493 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 ZCCHC2Q9C0B9 1178 aaKnown RBP12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 GBA3Q9H227 469 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 ZNF768Q9H5H4 540 aaKnown RBP12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 C10orf88Q9H8K7 445 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 GEMIN8Q9NWZ8 242 aaKnown RBP12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 RSPH14Q9UHP6 348 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 TRHDEQ9UKU6 1024 aa12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.77□□□□□ -0.37
HMGCS1-205ENST00000508319 RCCD1A6NED2 376 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 KIF1CO43896 1103 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 UGT1A9O60656 530 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 PPFIA2O75334 1257 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 SFTPCP11686 197 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 ZNF28P17035 718 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 AMD1P17707 334 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 VCLP18206 1134 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 UGT1A6P19224 532 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 UGT1A1P22309 533 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 UGT1A4P22310 534 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 MAP4P27816 1152 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 RBL1P28749 1068 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 CTNNA1P35221 906 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 SEPHS1P49903 392 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 SH3BP2P78314 561 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 OTUD4Q01804 1114 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 ABHD18Q0P651 414 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 XRCC4Q13426 336 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 ITGA9Q13797 1035 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 PTPRCAPQ14761 206 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 LDLRAP1Q5SW96 308 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 FAM83HQ6ZRV2 1179 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 PRSS42Q7Z5A4 293 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 DAAM2Q86T65 1068 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 AMZ2Q86W34 360 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 RASGEF1AQ8N9B8 481 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 BRSK1Q8TDC3 778 aa12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 KIAA1143Q96AT1 154 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-205ENST00000508319 CXorf40BQ96DE9 158 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms