RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 PDE10AQ9Y233 779 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 PIN4Q9Y237 131 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 GIT1Q9Y2X7 761 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 TPRKBQ9Y3C4 175 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 TSC22D4Q9Y3Q8 395 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 FAM32AQ9Y421 112 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 HEMK1Q9Y5R4 338 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 GPR45Q9Y5Y3 372 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 CPQQ9Y646 472 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 GJA3Q9Y6H8 435 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 OAS3Q9Y6K5 1087 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 HSPE1-MOB4S4R3N1 261 aa4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 FNDC1Q4ZHG4 1894 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 MYO18AQ92614 2054 aaKnown RBP4.92□□□□□ -1.62
HMGB3P16-201ENST00000508037 ATP6AP2A0A1C7CYW4 349 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 KRBA1A5PL33 1030 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 MROH6A6NGR9 719 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF99A8MXY4 864 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SUPT3HB4E1H0 165 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 G3V2T6 193 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 H0Y626 953 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CLDN5O00501 218 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CD3EAPO15446 510 aaKnown RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 IRAK2O43187 625 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 NDUFS2O75306 463 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 UGT2B11O75310 529 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 BCAS1O75363 584 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 USP2O75604 605 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ATP6AP2O75787 350 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 RPP40O75818 363 aaKnown RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CNMDO75829 334 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 RECQL5O94762 991 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 GABARAPO95166 117 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 KCNH1O95259 989 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 TRIM16O95361 564 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SNAP29O95721 258 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 MT-CYBP00156 380 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 EPOP01588 193 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ALPLP05186 524 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 HLA-DQB2P05538 268 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 GSNP06396 782 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 F7P08709 466 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 TFPTP0C1Z6 253 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 USP17L7P0C7H9 530 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 LINC00032P0C843 101 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 PRR35P0CG20 571 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF286BP0CG31 522 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF182P17025 639 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF37AP17032 561 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 IL1RNP18510 177 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 GGT1P19440 569 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 HLA-DPA1P20036 260 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CD9P21926 228 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 MATN1P21941 496 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 KCNA5P22460 613 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 IL12AP29459 219 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 RPL9P32969 192 aaKnown RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 MTHFRP42898 656 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 GJA8P48165 433 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ARHGDIAP52565 204 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 PLK1P53350 603 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 PLA2G16P53816 162 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CXCR4P61073 352 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CSNK2BP67870 215 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 TUBA1BP68363 451 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CTBSQ01459 385 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ACVR1Q04771 509 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 YWHAHQ04917 246 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CLCQ05315 142 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CDC20Q12834 499 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 PWP1Q13610 501 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 VGLL4Q14135 290 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 POLD3Q15054 466 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 PLCL1Q15111 1095 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 INAQ16352 499 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 PFKFB4Q16877 469 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 PLA2G4EQ3MJ16 856 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ANKDD1AQ495B1 522 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 ARSJQ5FYB0 599 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 XKR7Q5GH72 579 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 PITRM1Q5JRX3 1037 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 OTUD3Q5T2D3 398 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 GPR158Q5T848 1215 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 DEPDC1Q5TB30 811 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 MANEALQ5VSG8 457 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 MARC1Q5VT66 337 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 KIAA0319Q5VV43 1072 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 WSCD1Q658N2 575 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 IQSEC1Q6DN90 963 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 GTF2IRD2BQ6EKJ0 949 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 TMEM53Q6P2H8 277 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 FIGNL1Q6PIW4 674 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 CYHR1Q6ZMK1 362 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 GPRIN3Q6ZVF9 776 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 PAQR9Q6ZVX9 377 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 TUBA1AQ71U36 451 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 PRSS48Q7RTY5 328 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 R3HCC1LQ7Z5L2 792 aaKnown RBP4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLCO6A1Q86UG4 719 aa4.91□□□□□ -1.62
HMGB3P16-201ENST00000508037 GTF2IRD2Q86UP8 949 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms