RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 TMEM115Q12893 351 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 GPS2Q13227 327 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 CTBP1Q13363 440 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 HNRNPDQ14103 355 aaKnown RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 STK38Q15208 465 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 ANGPT1Q15389 498 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 SSX2Q16385 188 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 Q3ZCU0 254 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 IFI44LQ53G44 452 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 PLAC9Q5JTB6 97 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 SPOUT1Q5T280 376 aaKnown RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 CYP4A22Q5TCH4 519 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 MORN5Q5VZ52 161 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 CAPRIN2Q6IMN6 1127 aaKnown RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 MIS18BP1Q6P0N0 1132 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 C6orf89Q6UWU4 347 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 ISLR2Q6UXK2 745 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 LEKR1Q6ZMV7 388 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 KIAA0408Q6ZU52 694 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 NEK8Q86SG6 692 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 DSG4Q86SJ6 1040 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 SYVN1Q86TM6 617 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 VPS36Q86VN1 386 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 DNAJC5GQ8N7S2 189 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 ZNF321PQ8N8H1 164 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 NECAB1Q8N987 351 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 NHLRC2Q8NBF2 726 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 BHLHE23Q8NDY6 225 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 SETD9Q8NE22 299 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 CLHC1Q8NHS4 586 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 PDCD6IPQ8WUM4 868 aaKnown RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 UBLCP1Q8WVY7 318 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 CORO2AQ92828 525 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 FBXO32Q969P5 355 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 PPP2R3CQ969Q6 453 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 LRRC59Q96AG4 307 aaKnown RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 EDC3Q96F86 508 aaKnown RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 TTC25Q96NG3 672 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 SMC6Q96SB8 1091 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 PARK7Q99497 189 aaKnown RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 PIP5K1AQ99755 562 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 TSG101Q99816 390 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 SEMA3CQ99985 751 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 SH2D3AQ9BRG2 576 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 NUDT22Q9BRQ3 303 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 ALG8Q9BVK2 526 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 QTRT1Q9BXR0 403 aaKnown RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 ACTRT3Q9BYD9 372 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 SEMA4CQ9C0C4 833 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 AMBRA1Q9C0C7 1298 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 ANKRD2Q9GZV1 360 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 DDX47Q9H0S4 455 aaKnown RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 ATG10Q9H0Y0 220 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 SMOC2Q9H3U7 446 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 AZI2Q9H6S1 392 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 UPF2Q9HAU5 1272 aaKnown RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 MAGEE1Q9HCI5 957 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 TUFT1Q9NNX1 390 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 CHRAC1Q9NRG0 131 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 TUBA8Q9NY65 449 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 SLC25A10Q9UBX3 287 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 IL17BQ9UHF5 180 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 TSPAN16Q9UKR8 245 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 NUDCQ9Y266 331 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 C15orf41Q9Y2V0 281 aa3.6□□□□□ -1.83
HMGB3P15-201ENST00000507326 A0A087WZY1 265 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 EDDM13A0A1B0GTR0 161 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 CFAP73A6NFT4 308 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 TUBAL3A6NHL2 446 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 OR6C65A6NJZ3 312 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 J3KTA2 159 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 SMIM22K7EJ46 135 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 KCNAB3O43448 404 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 TNFSF14O43557 240 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 TRIAP1O43715 76 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 TLX2O43763 284 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 VEGFDO43915 354 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 MOSPD3O75425 235 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 PRAMEF12O95522 483 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 ECDO95905 644 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 MBD3O95983 291 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 FESP07332 822 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 NHLRC4P0CG21 123 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 IRF1P10914 325 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 PECAM1P16284 738 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 GJA1P17302 382 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 NDUFB7P17568 137 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 EPORP19235 508 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 ITIH1P19827 911 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 PTBP1P26599 531 aaKnown RBP eCLIP3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 CERS1P27544 350 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 RPA1P27694 616 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 PCSK6P29122 969 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 AVPR2P30518 371 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 CPOXP36551 454 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 PNPLA4P41247 253 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 DHPSP49366 369 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 CLCNKBP51801 687 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 UFM1P61960 85 aa3.59□□□□□ -1.83
HMGB3P15-201ENST00000507326 CSNK2BP67870 215 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms