RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 TAZQ16635 292 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 DEFB109BQ30KR1 87 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 SIRPB2Q5JXA9 342 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 ATP1A1-AS1Q5TC04 95 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 AGAP9Q5VTM2 703 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 C16orf46Q6P387 395 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 WASH2PQ6VEQ5 465 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 SPOCD1Q6ZMY3 1216 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 BZW1Q7L1Q6 419 aaKnown RBP11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 C11orf96Q7Z7L8 435 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 TTC30BQ8N4P2 665 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 SLC25A41Q8N5S1 370 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 ESX1Q8N693 406 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 OR6C1Q96RD1 312 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 ULBP3Q9BZM4 244 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 ZNF768Q9H5H4 540 aaKnown RBP11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 SLC40A1Q9NP59 571 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 WASH6PQ9NQA3 447 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 KLHL8Q9P2G9 620 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 WDR37Q9Y2I8 494 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 MRPS18BQ9Y676 258 aaKnown RBP11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 RPS6KL1Q9Y6S9 549 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 SPTA1P02549 2419 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 LOC285095A0A1B0GVY8 99 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 TOX3O15405 576 aaPredicted RBP11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 GPR39O43194 453 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 MTSS1O43312 755 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 PSTPIP1O43586 416 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 KIF1CO43896 1103 aaKnown RBP11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 TCN2P20062 427 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 SPAM1P38567 509 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 HALP42357 657 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 NR2C2P49116 596 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 MC1RQ01726 317 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 ADCY2Q08462 1091 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 TCEAL1Q15170 157 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 CHRNA6Q15825 494 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 SKIDA1Q1XH10 827 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 CACHD1Q5VU97 1274 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 IRGCQ6NXR0 463 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 FAM151BQ6UXP7 276 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 FAM92BQ6ZTR7 304 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 PRSS42Q7Z5A4 293 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 ZC3H18Q86VM9 953 aaKnown RBP11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 RBM12BQ8IXT5 1001 aaKnown RBP11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 GALNT6Q8NCL4 622 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 IPMKQ8NFU5 416 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 GPR150Q8NGU9 434 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 C9orf43Q8TAL5 461 aaPredicted RBP11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 BRSK1Q8TDC3 778 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 BLOC1S5Q8TDH9 187 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 HAUS1Q96CS2 278 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 ELMO2Q96JJ3 720 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 MRGPRX2Q96LB1 330 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 GOLPH3Q9H4A6 298 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 TRABDQ9H4I3 376 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 IL26Q9NPH9 171 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 ZNF71Q9NQZ8 489 aaPredicted RBP11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 CROTQ9UKG9 612 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 INTUQ9ULD6 942 aa11.33□□□□□ -0.6
HMGCS1-204ENST00000507293 GLYATL1P3A0A0U1RQE8 302 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 CYSRT1A8MQ03 144 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 BUD23O43709 281 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 UGT1A9O60656 530 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 KIAA0754O94854 1291 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 NDUFA10O95299 355 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 UGT1A6P19224 532 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 PTMSP20962 102 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 UGT1A1P22309 533 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 UGT1A4P22310 534 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 F8A1P23610 371 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 PBLDP30039 288 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 CA5AP35218 305 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 DLSTP36957 453 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 TNNT3P45378 269 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 CTSCP53634 463 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 PPP1CAP62136 330 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 IL11RAQ14626 422 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 PPP2R5EQ16537 467 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 ZDHHC20Q5W0Z9 365 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 C6orf15Q6UXA7 325 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 PID1Q7Z2X4 250 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 GLT6D1Q7Z4J2 308 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 AMZ2Q86W34 360 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 RASGRP3Q8IV61 690 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 ZNF567Q8N184 647 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 RASGEF1AQ8N9B8 481 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 KLHL6Q8WZ60 621 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 P3H4Q92791 437 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 STAMBPL1Q96FJ0 436 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 ZDHHC12Q96GR4 267 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 OXNAD1Q96HP4 312 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 TTC25Q96NG3 672 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 QKIQ96PU8 341 aaKnown RBP eCLIP11.32□□□□□ -0.61e-11■■■□□ 14.7
HMGCS1-204ENST00000507293 FCRL5Q96RD9 977 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 ZCCHC2Q9C0B9 1178 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 EPN3Q9H201 632 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 UGT1A7Q9HAW7 530 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 UGT1A10Q9HAW8 530 aa11.32□□□□□ -0.6
HMGCS1-204ENST00000507293 UGT1A8Q9HAW9 530 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms