RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ABCG8Q9H221 673 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 NOL6Q9H6R4 1146 aaKnown RBP7.05□□□□□ -1.28
VCAN-207ENST00000507162 ACTR5Q9H9F9 607 aaPredicted RBP7.05□□□□□ -1.28
VCAN-207ENST00000507162 PCMTD2Q9NV79 361 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 SOHLH2Q9NX45 425 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 ADAM21Q9UKJ8 722 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 MEMO1Q9Y316 297 aa7.05□□□□□ -1.28
VCAN-207ENST00000507162 NCOA6Q14686 2063 aaPredicted RBP7.04□□□□□ -1.28
VCAN-207ENST00000507162 FAM171A2A8MVW0 826 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 FOXO6A8MYZ6 492 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 PROM1O43490 865 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 PALMO75781 387 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 WISP2O76076 250 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 SLCO2B1O94956 709 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 RORAP35398 523 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 FMO5P49326 533 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 YBX1P67809 324 aaKnown RBP7.04□□□□□ -1.28
VCAN-207ENST00000507162 ATP11AP98196 1134 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 DPTQ07507 201 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 CETN1Q12798 172 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 MEA1Q16626 185 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 RAB6CQ53S08 254 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 DNTTIP2Q5QJE6 756 aaKnown RBP7.04□□□□□ -1.28
VCAN-207ENST00000507162 FBXO38Q6PIJ6 1188 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 B4GALNT4Q76KP1 1039 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 TECPR1Q7Z6L1 1165 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 TSPAN33Q86UF1 283 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 PHC2Q8IXK0 858 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 ACBD4Q8NC06 268 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 C1orf131Q8NDD1 294 aaKnown RBP7.04□□□□□ -1.28
VCAN-207ENST00000507162 ZNF397Q8NF99 534 aaPredicted RBP7.04□□□□□ -1.28
VCAN-207ENST00000507162 EXD1Q8NHP7 514 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 PTERQ96BW5 349 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 ECHDC3Q96DC8 303 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 MAGED4Q96JG8 741 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 KREMEN1Q96MU8 473 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 TREX2Q9BQ50 279 aaPredicted RBP7.04□□□□□ -1.28
VCAN-207ENST00000507162 DHRS4Q9BTZ2 278 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 RIOK2Q9BVS4 552 aaKnown RBP7.04□□□□□ -1.28
VCAN-207ENST00000507162 POLDIP3Q9BY77 421 aaKnown RBP7.04□□□□□ -1.28
VCAN-207ENST00000507162 RAB6CQ9H0N0 254 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 RETREG1Q9H6L5 497 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 SLC40A1Q9NP59 571 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 UBE2TQ9NPD8 197 aaPredicted RBP7.04□□□□□ -1.28
VCAN-207ENST00000507162 PLA2G3Q9NZ20 509 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 EDARQ9UNE0 448 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 DNAJC16Q9Y2G8 782 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 LUC7L2Q9Y383 392 aaKnown RBP7.04□□□□□ -1.28
VCAN-207ENST00000507162 MORC2Q9Y6X9 1032 aaPredicted RBP7.04□□□□□ -1.28
VCAN-207ENST00000507162 ZANQ9Y493 2812 aa7.04□□□□□ -1.28
VCAN-207ENST00000507162 SONP18583 2426 aaKnown RBP7.03□□□□□ -1.28
VCAN-207ENST00000507162 CCDC66A2RUB6 948 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 TLCD2A6NGC4 264 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 OR52A4PA6NMU1 304 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 TMEM150CB9EJG8 249 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 INAFM1C9JVW0 142 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 GOLGA8SH3BPF8 625 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 AGPSO00116 658 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 TRAFD1O14545 582 aaPredicted RBP7.03□□□□□ -1.28
VCAN-207ENST00000507162 KLHL18O94889 574 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 SOD1P00441 154 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 CRYABP02511 175 aaKnown RBP7.03□□□□□ -1.28
VCAN-207ENST00000507162 PYGMP11217 842 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 CTPS1P17812 591 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 UGT1A4P22310 534 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 LHCGRP22888 699 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 RPL10P27635 214 aaKnown RBP7.03□□□□□ -1.28
VCAN-207ENST00000507162 EPHB2P29323 1055 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 CSNK1DP48730 415 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 YBEYP58557 167 aaPredicted RBP7.03□□□□□ -1.28
VCAN-207ENST00000507162 NRG1Q02297 640 aaPredicted RBP7.03□□□□□ -1.28
VCAN-207ENST00000507162 ADCY2Q08462 1091 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 ABRQ12979 859 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 CDO1Q16878 200 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 PLA2G4EQ3MJ16 856 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 TDRD12Q587J7 1177 aaKnown RBP7.03□□□□□ -1.28
VCAN-207ENST00000507162 ZFYVE27Q5T4F4 411 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 FAM102AQ5T9C2 384 aaPredicted RBP7.03□□□□□ -1.28
VCAN-207ENST00000507162 MANEALQ5VSG8 457 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 C1orf189Q5VU69 101 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 ISLR2Q6UXK2 745 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 C3P1Q6ZMU1 363 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 PPP1R32Q7Z5V6 425 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 KMT5CQ86Y97 462 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 TAB3Q8N5C8 712 aaPredicted RBP7.03□□□□□ -1.28
VCAN-207ENST00000507162 AOPEPQ8N6M6 819 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 EHBP1Q8NDI1 1231 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 OR1L3Q8NH93 324 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 EPS8L1Q8TE68 723 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 SNX21Q969T3 373 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 SLC35C1Q96A29 364 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 COX14Q96I36 57 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 THOC3Q96J01 351 aaKnown RBP7.03□□□□□ -1.28
VCAN-207ENST00000507162 ALPK1Q96QP1 1244 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 TRIM56Q9BRZ2 755 aaKnown RBP7.03□□□□□ -1.28
VCAN-207ENST00000507162 CINPQ9BW66 212 aaPredicted RBP7.03□□□□□ -1.28
VCAN-207ENST00000507162 TLR10Q9BXR5 811 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 LHPPQ9H008 270 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 RAB33BQ9H082 229 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms