RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 CERS6Q6ZMG9 384 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 NT5DC3Q86UY8 548 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 NLRP8Q86W28 1048 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 CPNE8Q86YQ8 564 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 LRRC49Q8IUZ0 686 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 MAP7D3Q8IWC1 876 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 GALNT11Q8NCW6 608 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 ARRDC2Q8TBH0 407 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 CLIP3Q96DZ5 547 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 MAP3K3Q99759 626 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 SYT11Q9BT88 431 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 ZSCAN5AQ9BUG6 496 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 MAK16Q9BXY0 300 aaKnown RBP8.1□□□□□ -1.11
SNF8-204ENST00000506104 SLC29A3Q9BZD2 475 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 NAT10Q9H0A0 1025 aaKnown RBP8.1□□□□□ -1.11
SNF8-204ENST00000506104 ING2Q9H160 280 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 AKIRIN1Q9H9L7 192 aaPredicted RBP8.1□□□□□ -1.11
SNF8-204ENST00000506104 RAD18Q9NS91 495 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 LMBRD1Q9NUN5 540 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 POT1Q9NUX5 634 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 IMP3Q9NV31 184 aaKnown RBP8.1□□□□□ -1.11
SNF8-204ENST00000506104 UBP1Q9NZI7 540 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 MYO6Q9UM54 1294 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 RPL26L1Q9UNX3 145 aaKnown RBP8.1□□□□□ -1.11
SNF8-204ENST00000506104 RP1L1Q8IWN7 2480 aaPredicted RBP8.09□□□□□ -1.11
SNF8-204ENST00000506104 LRRD1A4D1F6 860 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 CLEC18AA5D8T8 446 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 OR2AG2A6NM03 316 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 SCRG1O75711 98 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 KLK3P07288 261 aaPredicted RBP8.09□□□□□ -1.11
SNF8-204ENST00000506104 FGF5P12034 268 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 NELFEP18615 380 aaKnown RBP8.09□□□□□ -1.11
SNF8-204ENST00000506104 PTPN4P29074 926 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 AKT1P31749 480 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 CD97P48960 835 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 CLCNKAP51800 687 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 DYNLT1P63172 113 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 SLC25A11Q02978 314 aaKnown RBP8.09□□□□□ -1.11
SNF8-204ENST00000506104 ACY1Q03154 408 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 IL10RAQ13651 578 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 PAFAH1B3Q15102 231 aaKnown RBP8.09□□□□□ -1.11
SNF8-204ENST00000506104 PPP2R5EQ16537 467 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.09□□□□□ -1.11
SNF8-204ENST00000506104 ANO6Q4KMQ2 910 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 CRTC2Q53ET0 693 aaPredicted RBP8.09□□□□□ -1.11
SNF8-204ENST00000506104 TMTC4Q5T4D3 741 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 CCDC183Q5T5S1 534 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 FAM69BQ5VUD6 431 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 ZNF787Q6DD87 383 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 KLHL35Q6PF15 583 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 FBXO38Q6PIJ6 1188 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 CLEC18BQ6UXF7 455 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 DET1Q7L5Y6 550 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 PRSS42Q7Z5A4 293 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 RFX6Q8HWS3 928 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 SLC25A41Q8N5S1 370 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 TRAM1L1Q8N609 369 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 CLEC18CQ8NCF0 446 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 GPR150Q8NGU9 434 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 MAML1Q92585 1016 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 TIMM29Q9BSF4 260 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 CBX8Q9HC52 389 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 SLC40A1Q9NP59 571 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 WASH6PQ9NQA3 447 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 FGF21Q9NSA1 209 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 AIPL1Q9NZN9 384 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 SNX7Q9UNH6 387 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 FARSAQ9Y285 508 aaKnown RBP8.09□□□□□ -1.11
SNF8-204ENST00000506104 WDR37Q9Y2I8 494 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 SHANK1Q9Y566 2161 aa8.09□□□□□ -1.11
SNF8-204ENST00000506104 SPTAN1Q13813 2472 aaKnown RBP8.09□□□□□ -1.11
SNF8-204ENST00000506104 FLNCQ14315 2725 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 GSAPA4D1B5 854 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 RGSL1A5PLK6 1076 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 OR6C74A6NCV1 312 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 ENO4A6NNW6 628 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 SMTNL1A8MU46 457 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 C21orf140B9A014 251 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 GOLGA6L22H0YM25 854 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 TOX3O15405 576 aaPredicted RBP8.08□□□□□ -1.12
SNF8-204ENST00000506104 BUD23O43709 281 aaKnown RBP8.08□□□□□ -1.12
SNF8-204ENST00000506104 KRT86O43790 486 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 DPM1O60762 260 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 CPNE3O75131 537 aaKnown RBP8.08□□□□□ -1.12
SNF8-204ENST00000506104 POP7O75817 140 aaKnown RBP8.08□□□□□ -1.12
SNF8-204ENST00000506104 POLBP06746 335 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 MMP2P08253 660 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 BRAFP15056 766 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 BPIP17213 487 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 CDH3P22223 829 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 OTX2P32243 289 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 TAS2R40P59535 323 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 TYRO3Q06418 890 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 CDK18Q07002 472 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 TMEM115Q12893 351 aaPredicted RBP8.08□□□□□ -1.12
SNF8-204ENST00000506104 ZBTB17Q13105 803 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 ELOAQ14241 798 aaKnown RBP8.08□□□□□ -1.12
SNF8-204ENST00000506104 MESDQ14696 234 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 PDK2Q15119 407 aa8.08□□□□□ -1.12
SNF8-204ENST00000506104 INPP5JQ15735 1006 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms