RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 SMAD1Q15797 465 aaKnown RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 BCL7AQ4VC05 210 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 RBM20Q5T481 1227 aaKnown RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 AGBL2Q5U5Z8 902 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 PMS2CLQ68D20 193 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 SH2D5Q6ZV89 423 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 LPCAT2Q7L5N7 544 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 TRABD2AQ86V40 505 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 DCP2Q8IU60 420 aaKnown RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 DCLK2Q8N568 766 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 RASGEF1AQ8N9B8 481 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 MFSD2AQ8NA29 543 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 ACMSDQ8TDX5 336 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 KCNJ9Q92806 393 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 MRRFQ96E11 262 aaKnown RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 SERAC1Q96JX3 654 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 ZNF514Q96K75 400 aaPredicted RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 LINC00615Q96LM1 132 aaPredicted RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 LGR4Q9BXB1 951 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 ZCCHC2Q9C0B9 1178 aaKnown RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 CLPBQ9H078 707 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 WDR26Q9H7D7 661 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 RMI1Q9H9A7 625 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 POPDC3Q9HBV1 291 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 FZD3Q9NPG1 666 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 PHPT1Q9NRX4 125 aaPredicted RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 KLHL42Q9P2K6 505 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 ATXN10Q9UBB4 475 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 TBK1Q9UHD2 729 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 GNPTGQ9UJJ9 305 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 INVSQ9Y283 1065 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 SLC17A4Q9Y2C5 497 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 MED16Q9Y2X0 877 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 VWA7Q9Y334 891 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 PCDHGA2Q9Y5H1 932 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 DNMT3AQ9Y6K1 912 aaPredicted RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 PRSS21Q9Y6M0 314 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 WDFY4Q6ZS81 3184 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 CACNA1HO95180 2353 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 ASXL3Q9C0F0 2248 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 C17orf113A0A1B0GUU1 675 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 A0A1W2PR77 199 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 GOLGA6L10A6NI86 522 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 TRIM49D1C9J1S8 452 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 H0Y8X5 98 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 CACNB4O00305 520 aaPredicted RBP7.1□□□□□ -1.27
NUP54-204ENST00000506098 TNFRSF10CO14798 259 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 RGS16O15492 202 aaPredicted RBP7.1□□□□□ -1.27
NUP54-204ENST00000506098 HRO43593 1189 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 NUAK1O60285 661 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 DNAJC6O75061 913 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 RFPL1O75677 317 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 CDK14O94921 469 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 ALDOAP04075 364 aaKnown RBP7.1□□□□□ -1.27
NUP54-204ENST00000506098 CEACAM5P06731 702 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 F7P08709 466 aaPredicted RBP7.1□□□□□ -1.27
NUP54-204ENST00000506098 OR56A5P0C7T3 313 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 MYZAPP0CAP1 466 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 ZNF8P17098 575 aaPredicted RBP7.1□□□□□ -1.27
NUP54-204ENST00000506098 KELP23276 732 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 PAX7P23759 505 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 ATP5DP30049 168 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 FMO4P31512 558 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 AKT1P31749 480 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 SLC26A3P40879 764 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 SKIV2L2P42285 1042 aaKnown RBP7.1□□□□□ -1.27
NUP54-204ENST00000506098 PRLHRP49683 370 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 CLCN7P51798 805 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 CDKN2DP55273 166 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 CLDN2P57739 230 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 SLC18A2Q05940 514 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 OVGP1Q12889 678 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 PTK2BQ14289 1009 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 GBX1Q14549 363 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 NFATC4Q14934 902 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 TMED2Q15363 201 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 ZSCAN26Q16670 478 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 PLK5Q496M5 336 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 ZNF658BQ4V348 819 aaPredicted RBP7.1□□□□□ -1.27
NUP54-204ENST00000506098 WDR45BQ5MNZ6 344 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 MROH9Q5TGP6 573 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 HECTD2Q5U5R9 776 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 PEAR1Q5VY43 1037 aaPredicted RBP7.1□□□□□ -1.27
NUP54-204ENST00000506098 UGT3A1Q6NUS8 523 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 C11orf96Q7Z7L8 435 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 CEP97Q8IW35 865 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 TMEFF1Q8IYR6 380 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 CLDN19Q8N6F1 224 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 ACVR1CQ8NER5 493 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 GDAP1Q8TB36 358 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 TLCD1Q96CP7 247 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 TSPAN17Q96FV3 270 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 DCUN1D1Q96GG9 259 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 ELMO2Q96JJ3 720 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 CABS1Q96KC9 395 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 HSPA12BQ96MM6 686 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 PANX3Q96QZ0 392 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 OLFM1Q99784 485 aa7.1□□□□□ -1.27
NUP54-204ENST00000506098 OR2AG1Q9H205 316 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms