RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 KIF19Q2TAC6 998 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 PRSS36Q5K4E3 855 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 CRTC1Q6UUV9 634 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 NEK10Q6ZWH5 1172 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 GOLM1Q8NBJ4 401 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 C15orf38-AP3S2A0A0A6YYH1 394 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 NEDD8-MDP1E9PL57 170 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 GAPDHSO14556 408 aaPredicted RBP11.19□□□□□ -0.62
NFKB1-205ENST00000505458 OR1I1O60431 355 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 MPC1LP0DKB6 136 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 TYRP14679 529 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 VIPR1P32241 457 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 CCR3P51677 355 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 FLOT2Q14254 428 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 MAP7D1Q3KQU3 841 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 PDCD4Q53EL6 469 aaKnown RBP11.19□□□□□ -0.62
NFKB1-205ENST00000505458 TMEM198Q66K66 360 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 ARPINQ7Z6K5 226 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 MICAL1Q8TDZ2 1067 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 TUBGCP3Q96CW5 907 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 PPP1R36Q96LQ0 422 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 ZNF184Q99676 751 aaPredicted RBP11.19□□□□□ -0.62
NFKB1-205ENST00000505458 SDR39U1Q9NRG7 319 aaPredicted RBP11.19□□□□□ -0.62
NFKB1-205ENST00000505458 NMRK1Q9NWW6 199 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 ZIM2Q9NZV7 527 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 CROTQ9UKG9 612 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 SRCAPQ6ZRS2 3230 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 MRASO14807 208 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 PIP5K1BO14986 540 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 KATNA1O75449 491 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 CLDN7O95471 211 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 C8GP07360 202 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 PRR35P0CG20 571 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 PRSS56P0CW18 603 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 PSME3P61289 254 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 ACCSLQ4AC99 568 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 XKR7Q5GH72 579 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 REP15Q6BDI9 236 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 ASB9Q96DX5 294 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 CLPTM1LQ96KA5 538 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 TNKS2Q9H2K2 1166 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 AKTIPQ9H8T0 292 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 CACNA2D2Q9NY47 1150 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 PSMD13Q9UNM6 376 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 ERVW-1Q9UQF0 538 aa11.19□□□□□ -0.62
NFKB1-205ENST00000505458 PSMD11O00231 422 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 FFAR2O15552 330 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 HOXC11O43248 304 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-205ENST00000505458 CDKN1CP49918 316 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-205ENST00000505458 CLCN2P51788 898 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 ERVK-8P63133 956 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 CHRNA6Q15825 494 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 PLEKHS1Q5SXH7 462 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 GPRC6AQ5T6X5 926 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 KBTBD6Q86V97 674 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 SLC26A7Q8TE54 656 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 BADQ92934 168 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 CDRT15Q96T59 188 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 SLC29A3Q9BZD2 475 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 ZDHHC6Q9H6R6 413 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 SARS2Q9NP81 518 aaKnown RBP11.18□□□□□ -0.62
NFKB1-205ENST00000505458 POLG2Q9UHN1 485 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 ANGPT2O15123 496 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 MOSPD3O75425 235 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 BCAS2O75934 225 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-205ENST00000505458 SIX3O95343 332 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-205ENST00000505458 CDH13P55290 713 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 MRPS35P82673 323 aaKnown RBP11.18□□□□□ -0.62
NFKB1-205ENST00000505458 ZNF423Q2M1K9 1284 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 LRRC66Q68CR7 880 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 CLEC6AQ6EIG7 209 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 IRGCQ6NXR0 463 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 BHMTQ93088 406 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 DCUN1D1Q96GG9 259 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 OBP2AQ9NY56 170 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 PLK2Q9NYY3 685 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 SUN2Q9UH99 717 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 FBXO10Q9UK96 956 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 G3BP2Q9UN86 482 aaKnown RBP11.18□□□□□ -0.62
NFKB1-205ENST00000505458 NPIPB15A6NHN6 443 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-205ENST00000505458 HIDE1A8MVS5 230 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 E2F3O00716 465 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 CASQ2O14958 399 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-205ENST00000505458 SLC25A14O95258 325 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-205ENST00000505458 CCR2P41597 374 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 ST8SIA6P61647 398 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 ZNF33BQ06732 778 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 CCNIQ14094 377 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 LRP8Q14114 963 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 SBSNQ6UWP8 590 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 TMEM25Q86YD3 366 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 EID2BQ96D98 161 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 EFHD1Q9BUP0 239 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 BRINP2Q9C0B6 783 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 LMAN2LQ9H0V9 348 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 BRD9Q9H8M2 597 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 SEMA4BQ9NPR2 832 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-205ENST00000505458 SLC27A6Q9Y2P4 619 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 ANGPTL3Q9Y5C1 460 aa11.18□□□□□ -0.62
NFKB1-205ENST00000505458 LINC01553A4QN01 128 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms