RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 STX1BP61266 288 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 RPL6Q02878 288 aaKnown RBP8.74□□□□□ -1.01
CASC9-201ENST00000504531 CDK5R2Q13319 367 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 FASTKQ14296 549 aaKnown RBP8.74□□□□□ -1.01
CASC9-201ENST00000504531 CSHL1Q14406 222 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 PDK3Q15120 406 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 TAF1AQ15573 450 aaPredicted RBP8.74□□□□□ -1.01
CASC9-201ENST00000504531 CRY1Q16526 586 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 LRIT3Q3SXY7 679 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 FAM182AQ5T1J6 154 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 NXNQ6DKJ4 435 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 TTC23LQ6PF05 361 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 ZNF765Q7L2R6 523 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 RTN4RL1Q86UN2 441 aaPredicted RBP8.74□□□□□ -1.01
CASC9-201ENST00000504531 SCN4BQ8IWT1 228 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 OR4L1Q8NH43 312 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 TRIB2Q92519 343 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 USP13Q92995 863 aaPredicted RBP8.74□□□□□ -1.01
CASC9-201ENST00000504531 FBXO32Q969P5 355 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 DGCR14Q96DF8 476 aaKnown RBP8.74□□□□□ -1.01
CASC9-201ENST00000504531 FAM193BQ96PV7 902 aaPredicted RBP8.74□□□□□ -1.01
CASC9-201ENST00000504531 ATOH8Q96SQ7 321 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 SH3GL3Q99963 347 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 DDX50Q9BQ39 737 aaKnown RBP8.74□□□□□ -1.01
CASC9-201ENST00000504531 LBHD1Q9BQE6 289 aaPredicted RBP8.74□□□□□ -1.01
CASC9-201ENST00000504531 GPATCH1Q9BRR8 931 aaKnown RBP8.74□□□□□ -1.01
CASC9-201ENST00000504531 OSBPL11Q9BXB4 747 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 SPATA16Q9BXB7 569 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 TRIM15Q9C019 465 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 EBF3Q9H4W6 596 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 PAK6Q9NQU5 681 aaPredicted RBP8.74□□□□□ -1.01
CASC9-201ENST00000504531 PAPOLBQ9NRJ5 636 aaKnown RBP8.74□□□□□ -1.01
CASC9-201ENST00000504531 GID8Q9NWU2 228 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.74□□□□□ -1.01
CASC9-201ENST00000504531 MPP6Q9NZW5 540 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 THEGQ9P2T0 379 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 ABCD2Q9UBJ2 740 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 UXTQ9UBK9 157 aaPredicted RBP8.74□□□□□ -1.01
CASC9-201ENST00000504531 CROTQ9UKG9 612 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 MAFFQ9ULX9 164 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 INPP5FQ9Y2H2 1132 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 AP4S1Q9Y587 144 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 A0A0C4DFX4 3053 aa8.74□□□□□ -1.01
CASC9-201ENST00000504531 MYO16Q9Y6X6 1858 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 F5H5T6 163 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 J3KR12 359 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 MSI1O43347 362 aaKnown RBP8.73□□□□□ -1.01
CASC9-201ENST00000504531 KDELR3O43731 214 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 ACSL4O60488 711 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 RNASEH1O60930 286 aaKnown RBP8.73□□□□□ -1.01
CASC9-201ENST00000504531 PARNO95453 639 aaKnown RBP8.73□□□□□ -1.01
CASC9-201ENST00000504531 MLYCDO95822 493 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 ALDH2P05091 517 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 ITGB1P05556 798 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 PYGLP06737 847 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 FAM87AP0C7U9 286 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 PRR35P0CG20 571 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 UMPSP11172 480 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 CKBP12277 381 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 IDO1P14902 403 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 ZNF37AP17032 561 aaPredicted RBP8.73□□□□□ -1.01
CASC9-201ENST00000504531 XRCC1P18887 633 aaPredicted RBP8.73□□□□□ -1.01
CASC9-201ENST00000504531 CR2P20023 1033 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 TACR2P21452 398 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 SAT1P21673 171 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 GPX3P22352 226 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 PEX2P28328 305 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 AVPR1AP37288 418 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 SLC11A2P49281 568 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 TUFMP49411 452 aaKnown RBP8.73□□□□□ -1.01
CASC9-201ENST00000504531 RABGGTBP53611 331 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 TXNL4AP83876 142 aaKnown RBP8.73□□□□□ -1.01
CASC9-201ENST00000504531 MS4A2Q01362 244 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 CACNB2Q08289 660 aaPredicted RBP8.73□□□□□ -1.01
CASC9-201ENST00000504531 CAMK2GQ13555 558 aaPredicted RBP8.73□□□□□ -1.01
CASC9-201ENST00000504531 ZNF235Q14590 738 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 PDCD2Q16342 344 aaPredicted RBP8.73□□□□□ -1.01
CASC9-201ENST00000504531 CTXN3Q4LDR2 81 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 UNC50Q53HI1 259 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 ALFQ53S48 1182 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 AARS2Q5JTZ9 985 aaKnown RBP8.73□□□□□ -1.01
CASC9-201ENST00000504531 CLLU1OSQ5K130 101 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 TCHHL1Q5QJ38 904 aaPredicted RBP8.73□□□□□ -1.01
CASC9-201ENST00000504531 RBM20Q5T481 1227 aaKnown RBP8.73□□□□□ -1.01
CASC9-201ENST00000504531 KANK2Q63ZY3 851 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 CWF19L1Q69YN2 538 aaKnown RBP8.73□□□□□ -1.01
CASC9-201ENST00000504531 AFTPHQ6ULP2 937 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 ANKS3Q6ZW76 656 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 SHISA5Q8N114 240 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 STK40Q8N2I9 435 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 SLC25A41Q8N5S1 370 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 ANKFN1Q8N957 763 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 OR6P1Q8NGX9 317 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 ZNF483Q8TF39 744 aaPredicted RBP8.73□□□□□ -1.01
CASC9-201ENST00000504531 PSMG2Q969U7 264 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 C19orf60Q96EN9 201 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 DCUN1D1Q96GG9 259 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 CDKN2AIPNLQ96HQ2 116 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 SLC45A3Q96JT2 553 aa8.73□□□□□ -1.01
CASC9-201ENST00000504531 ZNF597Q96LX8 424 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms