RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 CA3P07451 260 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 CAPN3P20807 821 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 CD9P21926 228 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 LPOP22079 712 aaPredicted RBP6.96□□□□□ -1.29
SNX25-202ENST00000504273 MC4RP32245 332 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 ALDH7A1P49419 539 aaKnown RBP6.96□□□□□ -1.29
SNX25-202ENST00000504273 CLCN2P51788 898 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 CLCQ05315 142 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 TWF1Q12792 350 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 RALGDSQ12967 914 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 SMAD4Q13485 552 aaKnown RBP6.96□□□□□ -1.29
SNX25-202ENST00000504273 PITRM1Q5JRX3 1037 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 ZSWIM9Q86XI8 627 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 GRIN3AQ8TCU5 1115 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 TWIST2Q8WVJ9 160 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 ESAMQ96AP7 390 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 TRPM5Q9NZQ8 1165 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 SPATA7Q9P0W8 599 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 POLG2Q9UHN1 485 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 VPS51Q9UID3 782 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 PCTPQ9UKL6 214 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 NOTCH4Q99466 2003 aa6.96□□□□□ -1.29
SNX25-202ENST00000504273 UBA6A0AVT1 1052 aaPredicted RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 TRIM38O00635 465 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 AZIN1O14977 448 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 LSM1O15116 133 aaKnown RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 PFDN1O60925 122 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 SRP72O76094 671 aaKnown RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 C8BP07358 591 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 SNRPB2P08579 225 aaKnown RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 ALPIP09923 528 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 LINC00032P0C843 101 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 UQCRBP14927 111 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 VCLP18206 1134 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 TCN1P20061 433 aaPredicted RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 GKP32189 559 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 CSKP41240 450 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 CDKL1Q00532 357 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 PDAP1Q13442 181 aaKnown RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 RAB33AQ14088 237 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 GK3PQ14409 553 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 GRM2Q14416 872 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 TLR1Q15399 786 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 GSTA3Q16772 222 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 IL23RQ5VWK5 629 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 TXNDC8Q6A555 127 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 HMBOX1Q6NT76 420 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 UGT2A3Q6UWM9 527 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 MFN1Q8IWA4 741 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 TMCO5AQ8N6Q1 288 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 LKAAEAR1Q8TD35 194 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 ABTB1Q969K4 478 aaPredicted RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 PPP2R3CQ969Q6 453 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 LMLNQ96KR4 655 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 TCF12Q99081 682 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 BTRCQ9Y297 605 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 TIMM22Q9Y584 194 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 PIKFYVEQ9Y2I7 2098 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 ZFC3H1O60293 1989 aaKnown RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 MAGEA13PA6NCF6 341 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 E2F3O00716 465 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 LINC00271P0C7V0 271 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 SPATA31D3P0C874 917 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 PKMP14618 531 aaKnown RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 HOXB8P17481 243 aaPredicted RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 CTPS1P17812 591 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 ACADVLP49748 655 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 NME5P56597 212 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 DEFB103AP81534 67 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 ART3Q13508 389 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 FLOT2Q14254 428 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 TRIP10Q15642 601 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 XKR7Q5GH72 579 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 HACD2Q6Y1H2 254 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 SPATA31D4Q6ZUB0 917 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 SDCCAG8Q86SQ7 713 aaPredicted RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 ARL14EPQ8N8R7 260 aaPredicted RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 ATP6V1E2Q96A05 226 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 CLIP3Q96DZ5 547 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 DUS3LQ96G46 650 aaKnown RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 DCUN1D1Q96GG9 259 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 HERC2P3Q9BVR0 1158 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 COPS7BQ9H9Q2 264 aaPredicted RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 SEMA4BQ9NPR2 832 aaPredicted RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 C6orf203Q9P0P8 240 aaPredicted RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 SUCOQ9UBS9 1254 aaKnown RBP6.96□□□□□ -1.3
SNX25-202ENST00000504273 GPR45Q9Y5Y3 372 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 PRSS21Q9Y6M0 314 aa6.96□□□□□ -1.3
SNX25-202ENST00000504273 TCRBV3S1A0A5B6 114 aa6.95□□□□□ -1.3
SNX25-202ENST00000504273 TMEM8BA6NDV4 472 aa6.95□□□□□ -1.3
SNX25-202ENST00000504273 NRP2O60462 931 aa6.95□□□□□ -1.3
SNX25-202ENST00000504273 BAIAP3O94812 1187 aa6.95□□□□□ -1.3
SNX25-202ENST00000504273 ZCCHC18P0CG32 403 aa6.95□□□□□ -1.3
SNX25-202ENST00000504273 CHRM3P20309 590 aa6.95□□□□□ -1.3
SNX25-202ENST00000504273 PMLP29590 882 aa6.95□□□□□ -1.3
SNX25-202ENST00000504273 TRIM25Q14258 630 aaKnown RBP6.95□□□□□ -1.3
SNX25-202ENST00000504273 INO80DQ53TQ3 878 aaPredicted RBP6.95□□□□□ -1.3
SNX25-202ENST00000504273 TPGS2Q68CL5 300 aa6.95□□□□□ -1.3
SNX25-202ENST00000504273 LAYNQ6UX15 382 aa6.95□□□□□ -1.3
SNX25-202ENST00000504273 ZNF783Q6ZMS7 281 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms