RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 KIAA1328Q86T90 577 aa21.7■■□□□ 1.06
LSM6-203ENST00000503982 CDKL3Q8IVW4 592 aaPredicted RBP21.7■■□□□ 1.06
LSM6-203ENST00000503982 CACNA2D3Q8IZS8 1091 aa21.7■■□□□ 1.06
LSM6-203ENST00000503982 TTC30BQ8N4P2 665 aa21.7■■□□□ 1.06
LSM6-203ENST00000503982 EXTL1Q92935 676 aa21.7■■□□□ 1.06
LSM6-203ENST00000503982 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.7■■□□□ 1.06
LSM6-203ENST00000503982 ZNF106Q9H2Y7 1883 aaKnown RBP21.7■■□□□ 1.06
LSM6-203ENST00000503982 KALRNO60229 2985 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 GCN1Q92616 2671 aaKnown RBP21.69■■□□□ 1.06
LSM6-203ENST00000503982 LILRA5A6NI73 299 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 UGT1A9O60656 530 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 EPOP01588 193 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 XRCC1P18887 633 aaPredicted RBP21.69■■□□□ 1.06
LSM6-203ENST00000503982 UGT1A6P19224 532 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 UGT1A1P22309 533 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 UGT1A4P22310 534 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 CTNNA1P35221 906 aaKnown RBP21.69■■□□□ 1.06
LSM6-203ENST00000503982 UGT1A3P35503 534 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 SLC19A1P41440 591 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 EIF3EP60228 445 aaKnown RBP21.69■■□□□ 1.06
LSM6-203ENST00000503982 UBE2IP63279 158 aaKnown RBP21.69■■□□□ 1.06
LSM6-203ENST00000503982 CYP4F2P78329 520 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 CCZ1BP86790 482 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 CCZ1P86791 482 aaPredicted RBP21.69■■□□□ 1.06
LSM6-203ENST00000503982 OTUD4Q01804 1114 aaKnown RBP21.69■■□□□ 1.06
LSM6-203ENST00000503982 ITGA9Q13797 1035 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 LDLRAP1Q5SW96 308 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 DARS2Q6PI48 645 aaKnown RBP21.69■■□□□ 1.06
LSM6-203ENST00000503982 ZNF662Q6ZS27 426 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 TMEM26Q6ZUK4 368 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 NKD1Q969G9 470 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 MED8Q96G25 268 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 TGM7Q96PF1 710 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 TEFMQ96QE5 360 aaKnown RBP21.69■■□□□ 1.06
LSM6-203ENST00000503982 FAM118BQ9BPY3 351 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 OSBPL8Q9BZF1 889 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 UGT1A7Q9HAW7 530 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 UGT1A10Q9HAW8 530 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 UGT1A8Q9HAW9 530 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 IL26Q9NPH9 171 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 IL17CQ9P0M4 197 aa21.69■■□□□ 1.06
LSM6-203ENST00000503982 RCCD1A6NED2 376 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 OR52A4PA6NMU1 304 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.68■■□□□ 1.06
LSM6-203ENST00000503982 KCNN4O15554 427 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 RAD1O60671 282 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 RASSF9O75901 435 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 UBXN7O94888 489 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 AGTP01019 485 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 GFERP55789 205 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 RWDD2BP57060 319 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 FOXM1Q08050 763 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 ACRBPQ8NEB7 543 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 ACTL9Q8TC94 416 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 LRRC45Q96CN5 670 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 GBA3Q9H227 469 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 POT1Q9NUX5 634 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 PDP2Q9P2J9 529 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 TMPRSS11EQ9UL52 423 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 PCDHA3Q9Y5H8 950 aa21.68■■□□□ 1.06
LSM6-203ENST00000503982 CCDC66A2RUB6 948 aa21.67■■□□□ 1.06
LSM6-203ENST00000503982 OR2AG2A6NM03 316 aa21.67■■□□□ 1.06
LSM6-203ENST00000503982 GPR39O43194 453 aa21.67■■□□□ 1.06
LSM6-203ENST00000503982 NRDCO43847 1150 aa21.67■■□□□ 1.06
LSM6-203ENST00000503982 MSH3P20585 1137 aa21.67■■□□□ 1.06
LSM6-203ENST00000503982 SEPHS1P49903 392 aa21.67■■□□□ 1.06
LSM6-203ENST00000503982 MC2RQ01718 297 aa21.67■■□□□ 1.06
LSM6-203ENST00000503982 ARHGAP22Q7Z5H3 698 aa21.67■■□□□ 1.06
LSM6-203ENST00000503982 AMZ2Q86W34 360 aa21.67■■□□□ 1.06
LSM6-203ENST00000503982 ZNF547Q8IVP9 402 aa21.67■■□□□ 1.06
LSM6-203ENST00000503982 KIAA1143Q96AT1 154 aaPredicted RBP21.67■■□□□ 1.06
LSM6-203ENST00000503982 APOL2Q9BQE5 337 aa21.67■■□□□ 1.06
LSM6-203ENST00000503982 ZNF624Q9P2J8 865 aaPredicted RBP21.67■■□□□ 1.06
LSM6-203ENST00000503982 HEMK1Q9Y5R4 338 aaPredicted RBP21.67■■□□□ 1.06
LSM6-203ENST00000503982 DUSP10Q9Y6W6 482 aa21.67■■□□□ 1.06
LSM6-203ENST00000503982 C2orf81A6NN90 581 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 POLR1CO15160 346 aaPredicted RBP21.66■■□□□ 1.06
LSM6-203ENST00000503982 RBP3P10745 1247 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 PLA2G2AP14555 144 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 PSMB4P28070 264 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 ARSDP51689 593 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 ANKRD20A2Q5SQ80 823 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 ANKRD20A1Q5TYW2 823 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 ANKRD20A3Q5VUR7 823 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 TMEM220Q6QAJ8 160 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 DET1Q7L5Y6 550 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 BMPERQ8N8U9 685 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 RTP4Q96DX8 246 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 ZPBPQ9BS86 351 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 LACRTQ9GZZ8 138 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 UCK1Q9HA47 277 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 PSMD13Q9UNM6 376 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 AAR2Q9Y312 384 aaKnown RBP21.66■■□□□ 1.06
LSM6-203ENST00000503982 ARL5AQ9Y689 179 aa21.66■■□□□ 1.06
LSM6-203ENST00000503982 CAPN5O15484 640 aaPredicted RBP21.65■■□□□ 1.06
LSM6-203ENST00000503982 PPFIA2O75334 1257 aa21.65■■□□□ 1.06
LSM6-203ENST00000503982 POP7O75817 140 aaKnown RBP21.65■■□□□ 1.06
LSM6-203ENST00000503982 TJP3O95049 919 aa21.65■■□□□ 1.06
LSM6-203ENST00000503982 ITGB2P05107 769 aa21.65■■□□□ 1.06
LSM6-203ENST00000503982 LIFP15018 202 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms