RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 FAM83HQ6ZRV2 1179 aaPredicted RBP15.99■□□□□ 0.15
SCLT1-204ENST00000503215 ZNF605Q86T29 641 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 TRAPPC5Q8IUR0 188 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 RTP4Q96DX8 246 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 MED8Q96G25 268 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 SRPK1Q96SB4 655 aaKnown RBP15.99■□□□□ 0.15
SCLT1-204ENST00000503215 VAT1Q99536 393 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 TIMM29Q9BSF4 260 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 OSBPL8Q9BZF1 889 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 GBA3Q9H227 469 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 TRABDQ9H4I3 376 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 STN1Q9H668 368 aaKnown RBP15.99■□□□□ 0.15
SCLT1-204ENST00000503215 TRHDEQ9UKU6 1024 aa15.99■□□□□ 0.15
SCLT1-204ENST00000503215 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCLT1-204ENST00000503215 GRID2IPA4D2P6 1211 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 LILRA5A6NI73 299 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 PYCARD-AS1I3L0S3 204 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 VIPP01282 170 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 PYGMP11217 842 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 SLC2A4P14672 509 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 LIFP15018 202 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 ADRA1AP35348 466 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 SPAM1P38567 509 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 LEPRP48357 1165 aaKnown RBP15.98■□□□□ 0.15
SCLT1-204ENST00000503215 XRCC4Q13426 336 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 DCAF12Q5T6F0 453 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 CCDC181Q5TID7 509 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 TIPARPQ7Z3E1 657 aaKnown RBP15.98■□□□□ 0.15
SCLT1-204ENST00000503215 GLT6D1Q7Z4J2 308 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 TMTC1Q8IUR5 882 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 MRFAP1L1Q96HT8 127 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 SLC12A9Q9BXP2 914 aa15.98■□□□□ 0.15
SCLT1-204ENST00000503215 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.98■□□□□ 0.15
SCLT1-204ENST00000503215 GLYATL1P3A0A0U1RQE8 302 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 MACROD2A1Z1Q3 448 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 PJA2O43164 708 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 KIF1CO43896 1103 aaKnown RBP15.97■□□□□ 0.15
SCLT1-204ENST00000503215 RAD1O60671 282 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 POP7O75817 140 aaKnown RBP15.97■□□□□ 0.15
SCLT1-204ENST00000503215 FAM87AP0C7U9 286 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 HLA-DPA1P20036 260 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 PSMB4P28070 264 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 NAP1L1P55209 391 aaKnown RBP15.97■□□□□ 0.15
SCLT1-204ENST00000503215 EIF3EP60228 445 aaKnown RBP15.97■□□□□ 0.15
SCLT1-204ENST00000503215 MSLNQ13421 630 aaPredicted RBP15.97■□□□□ 0.15
SCLT1-204ENST00000503215 TBR1Q16650 682 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 GPRC6AQ5T6X5 926 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 RANBP10Q6VN20 620 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 TRIM48Q8IWZ4 208 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 UNC5BQ8IZJ1 945 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 CACNA2D3Q8IZS8 1091 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 LRRC57Q8N9N7 239 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 CCDC112Q8NEF3 446 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 CCDC110Q8TBZ0 833 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 RSC1A1Q92681 617 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 TGM7Q96PF1 710 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 UCK1Q9HA47 277 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 SLC40A1Q9NP59 571 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 HACD3Q9P035 362 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 PILRAQ9UKJ1 303 aa15.97■□□□□ 0.15
SCLT1-204ENST00000503215 MN1Q10571 1320 aaPredicted RBP15.96■□□□□ 0.15
SCLT1-204ENST00000503215 BOD1L1Q8NFC6 3051 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 OR2AG2A6NM03 316 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 UBXN7O94888 489 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 C9P02748 559 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 RBP3P10745 1247 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 IDSP22304 550 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 CTNNA2P26232 953 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 COPS2P61201 443 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 PPP1CAP62136 330 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 GPR18Q14330 331 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 SPARCL1Q14515 664 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 ANKRD20A2Q5SQ80 823 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 ANKRD20A1Q5TYW2 823 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 AGAP9Q5VTM2 703 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 ANKRD20A3Q5VUR7 823 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 TMEM220Q6QAJ8 160 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 WASH2PQ6VEQ5 465 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 DET1Q7L5Y6 550 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 PLXDC1Q8IUK5 500 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 IL22RA1Q8N6P7 574 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 BEND7Q8N7W2 519 aaPredicted RBP15.96■□□□□ 0.15
SCLT1-204ENST00000503215 GPR150Q8NGU9 434 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 ZNF398Q8TD17 642 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 C9orf72Q96LT7 481 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 FSD1LQ9BXM9 530 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 ASPSCR1Q9BZE9 553 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 WASH6PQ9NQA3 447 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 FBXO8Q9NRD0 319 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 SIDT1Q9NXL6 827 aaKnown RBP15.96■□□□□ 0.15
SCLT1-204ENST00000503215 PSMD13Q9UNM6 376 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 PKP3Q9Y446 797 aa15.96■□□□□ 0.15
SCLT1-204ENST00000503215 CCL22O00626 93 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 STX7O15400 261 aaKnown RBP15.95■□□□□ 0.14
SCLT1-204ENST00000503215 CAPN5O15484 640 aaPredicted RBP15.95■□□□□ 0.14
SCLT1-204ENST00000503215 KCNN4O15554 427 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 AMD1P17707 334 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 PBLDP30039 288 aaPredicted RBP15.95■□□□□ 0.14
SCLT1-204ENST00000503215 PTPN7P35236 360 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 TNNT3P45378 269 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms