RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	MTX2	O75431	263 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	RHOBTB1	O94844	696 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	SLC25A14	O95258	325 aa	Predicted RBP	11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	PCCB	P05166	539 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	GSTA1	P08263	222 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	HOXC4	P09017	264 aa	Predicted RBP	11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	DHRS4L1	P0CG22	281 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	COL6A2	P12110	1019 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	ATP1B2	P14415	290 aa	Predicted RBP	11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	ZNF37A	P17032	561 aa	Predicted RBP	11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	SLC26A3	P40879	764 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	PRLHR	P49683	370 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	CTSC	P53634	463 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	CDK3	Q00526	305 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	TMEM115	Q12893	351 aa	Predicted RBP	11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	SGCG	Q13326	291 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	GBX1	Q14549	363 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	ZNF658B	Q4V348	819 aa	Predicted RBP	11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	BCL7A	Q4VC05	210 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	ZNF648	Q5T619	568 aa	Predicted RBP	11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	KIAA0895L	Q68EN5	471 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	ADGRG6	Q86SQ4	1221 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	LCA5	Q86VQ0	697 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	HEATR4	Q86WZ0	1026 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	FRMD1	Q8N878	549 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	RASGEF1A	Q8N9B8	481 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	NAT14	Q8WUY8	206 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	HIC2	Q96JB3	615 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	GPR21	Q99679	349 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	ORAI3	Q9BRQ5	295 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	C1QTNF7	Q9BXJ2	289 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	PCED1A	Q9H1Q7	454 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	CCDC68	Q9H2F9	335 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	EPHX3	Q9H6B9	360 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	CNOT10	Q9H9A5	744 aa	Known RBP	11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	IGSF5	Q9NSI5	407 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	TAS2R13	Q9NYV9	303 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	EMCN	Q9ULC0	261 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	PLLP	Q9Y342	182 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	DHRS7	Q9Y394	339 aa		11.99	□□□□□ -0.49
MATR3-231	ENST00000502394	CCDC163	A0A0D9SF12	145 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	TMEM221	A6NGB7	291 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	CFAP99	D6REC4	459 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394		M0R296	226 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	QSOX1	O00391	747 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	COPE	O14579	308 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	TM9SF1	O15321	606 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	VEGFD	O43915	354 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	VPS26A	O75436	327 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	TSPAN12	O95859	305 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	MSH3	P20585	1137 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	SAT1	P21673	171 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	MAT2A	P31153	395 aa	Known RBP	11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	RPA3	P35244	121 aa	Predicted RBP	11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	PXN	P49023	591 aa	Predicted RBP	11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	SLC12A2	P55011	1212 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	WDR4	P57081	412 aa	Known RBP	11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	INPP5A	Q14642	412 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	TAF1B	Q53T94	588 aa	Predicted RBP	11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	PTRHD1	Q6GMV3	140 aa	Known RBP	11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	PAQR3	Q6TCH7	311 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	XKR5	Q6UX68	686 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	TRIM74	Q86UV6	250 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	TMEM151A	Q8N4L1	468 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	ARFGAP2	Q8N6H7	521 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	TMEM145	Q8NBT3	493 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	MDM1	Q8TC05	714 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	TCP10L	Q8TDR4	215 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	KCTD4	Q8WVF5	259 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	ANKRD49	Q8WVL7	239 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	RLN3	Q8WXF3	142 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	SELENOS	Q9BQE4	189 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	LGR4	Q9BXB1	951 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	SLC13A1	Q9BZW2	595 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	VPS11	Q9H270	941 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	C12orf65	Q9H3J6	166 aa	Known RBP	11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	GPAM	Q9HCL2	828 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	TRIM39	Q9HCM9	518 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	FZD3	Q9NPG1	666 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	ZNF358	Q9NW07	568 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	SLC17A7	Q9P2U7	560 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	ATXN10	Q9UBB4	475 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	DCDC2	Q9UHG0	476 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	TLK1	Q9UKI8	766 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	ACOT9	Q9Y305	439 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	VCAN	P13611	3396 aa		11.98	□□□□□ -0.49
MATR3-231	ENST00000502394	CHUK	O15111	745 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	AXIN1	O15169	862 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	SLC31A1	O15431	190 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	PLIN3	O60664	434 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	KLHL2	O95198	593 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	ZWINT	O95229	277 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	ASMTL	O95671	621 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	PROC	P04070	461 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	SBK3	P0C264	359 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	OR56A5	P0C7T3	313 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	RALB	P11234	206 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	CHN1	P15882	459 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	HNRNPA2B1	P22626	353 aa	Known RBP	11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 58 ms