RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 CMAHPQ9Y471 501 aa2.35□□□□□ -2.03
RBM39-242ENST00000498280 IGKV3D-15A0A087WSY6 115 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 OR2A25A4D2G3 310 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 EIF4E1BA6NMX2 242 aaKnown RBP2.34□□□□□ -2.03
RBM39-242ENST00000498280 MID1O15344 667 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 PAPSS1O43252 624 aaPredicted RBP2.34□□□□□ -2.03
RBM39-242ENST00000498280 FIBPO43427 364 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 GPC4O75487 556 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 DAB1O75553 588 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 HIST1H2ABP04908 130 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 SRCP12931 536 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 MMP9P14780 707 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 AKR1B1P15121 316 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 HIST1H2ADP20671 130 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 HOXA13P31271 388 aaPredicted RBP2.34□□□□□ -2.03
RBM39-242ENST00000498280 EIF2DP41214 584 aaKnown RBP2.34□□□□□ -2.03
RBM39-242ENST00000498280 APOBEC1P41238 236 aaKnown RBP2.34□□□□□ -2.03
RBM39-242ENST00000498280 MSH2P43246 934 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 NRIP1P48552 1158 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 CLCNKAP51800 687 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 GPR143P51810 404 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 TAS2R38P59533 333 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 SEC61BP60468 96 aaKnown RBP2.34□□□□□ -2.03
RBM39-242ENST00000498280 IFI35P80217 286 aaPredicted RBP2.34□□□□□ -2.03
RBM39-242ENST00000498280 MRPS5P82675 430 aaKnown RBP2.34□□□□□ -2.03
RBM39-242ENST00000498280 ECT2LQ008S8 904 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 FOXM1Q08050 763 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 SPOCK1Q08629 439 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 SREBF2Q12772 1141 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 ZNF155Q12901 538 aaPredicted RBP2.34□□□□□ -2.03
RBM39-242ENST00000498280 LRMPQ12912 555 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 MAD2L1Q13257 205 aaPredicted RBP2.34□□□□□ -2.03
RBM39-242ENST00000498280 KCTD2Q14681 263 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 PCLAFQ15004 111 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 OASLQ15646 514 aaKnown RBP2.34□□□□□ -2.03
RBM39-242ENST00000498280 DLG2Q15700 870 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 DCST1Q5T197 706 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 CFAP58Q5T655 872 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 FRG2Q64ET8 278 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 HIST3H2AQ7L7L0 130 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 CCDC190Q86UF4 302 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 KBTBD6Q86V97 674 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 SCYL3Q8IZE3 742 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 SCML4Q8N228 414 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 NME8Q8N427 588 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 RASGEF1CQ8N431 466 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 POC5Q8NA72 575 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 ACVR1CQ8NER5 493 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 OR1J2Q8NGS2 313 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 TRPC4APQ8TEL6 797 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 SLC44A1Q8WWI5 657 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 JAKMIP2Q96AA8 810 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 MTBPQ96DY7 904 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 FEM1CQ96JP0 617 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 PAFAH2Q99487 392 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 MTERF1Q99551 399 aaKnown RBP2.34□□□□□ -2.03
RBM39-242ENST00000498280 CSTL1Q9H114 145 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 HRH4Q9H3N8 390 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 EPB41L5Q9HCM4 733 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 STK39Q9UEW8 545 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 SEC63Q9UGP8 760 aaKnown RBP2.34□□□□□ -2.03
RBM39-242ENST00000498280 PADI1Q9ULC6 663 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 LOXL2Q9Y4K0 774 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 SNX8Q9Y5X2 465 aa2.34□□□□□ -2.03
RBM39-242ENST00000498280 IGKV6D-41A0A0C4DH26 115 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 KANSL1LA0AUZ9 987 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 FAM172BPA6NC97 362 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 FAM90A26D6RGX4 464 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 MAP2K7O14733 419 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 SMAD9O15198 467 aaKnown RBP2.33□□□□□ -2.04
RBM39-242ENST00000498280 ADAMDEC1O15204 470 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 ADAM20O43506 726 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 EXTL3O43909 919 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 MITFO75030 526 aaPredicted RBP2.33□□□□□ -2.04
RBM39-242ENST00000498280 TMCC2O75069 709 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 ERAL1O75616 437 aaKnown RBP2.33□□□□□ -2.04
RBM39-242ENST00000498280 RFPL2O75678 378 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 GAGE7O76087 117 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 GAGE12FP0CL80 117 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 GAGE12GP0CL81 117 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 GAGE12IP0CL82 117 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 ACTN1P12814 892 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 RRM1P23921 792 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 CORO1AP31146 461 aaKnown RBP2.33□□□□□ -2.04
RBM39-242ENST00000498280 MMP14P50281 582 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 CLDN20P56880 219 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 KRTAP10-8P60410 259 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 PPP2R2BQ00005 443 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 NUCB1Q02818 461 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 GAGE1Q13065 139 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 GAGE4Q13068 117 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 KCNC3Q14003 757 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 BECN1Q14457 450 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 CALCRLQ16602 461 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 DECR1Q16698 335 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 RARS2Q5T160 578 aaKnown RBP2.33□□□□□ -2.04
RBM39-242ENST00000498280 C18orf63Q68DL7 685 aa2.33□□□□□ -2.04
RBM39-242ENST00000498280 PAPD4Q6PIY7 484 aaKnown RBP2.33□□□□□ -2.04
RBM39-242ENST00000498280 C19orf48Q6RUI8 117 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms