RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 FNDC3BQ53EP0 1204 aaKnown RBP7.6□□□□□ -1.19
CDC42-205ENST00000498236 RBM20Q5T481 1227 aaKnown RBP7.6□□□□□ -1.19
CDC42-205ENST00000498236 HECTD2Q5U5R9 776 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 GKAP1Q5VSY0 366 aaPredicted RBP7.6□□□□□ -1.19
CDC42-205ENST00000498236 ZNF549Q6P9A3 640 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 LINC00114Q6XXX2 140 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 SNX20Q7Z614 316 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 CPLX4Q7Z7G2 160 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 SLC41A1Q8IVJ1 513 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 CEP97Q8IW35 865 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 PIANPQ8IYJ0 282 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 CENPLQ8N0S6 344 aaPredicted RBP7.6□□□□□ -1.19
CDC42-205ENST00000498236 OTUD6BQ8N6M0 293 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 GPATCH11Q8N954 259 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 LRRC8CQ8TDW0 803 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 ZNF473Q8WTR7 871 aaKnown RBP7.6□□□□□ -1.19
CDC42-205ENST00000498236 OR8D1Q8WZ84 308 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.6□□□□□ -1.19
CDC42-205ENST00000498236 KLHL32Q96NJ5 620 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 GPR78Q96P69 363 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 TTC1Q99614 292 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 PAIP2Q9BPZ3 127 aaKnown RBP7.6□□□□□ -1.19
CDC42-205ENST00000498236 AARSD1Q9BTE6 412 aaKnown RBP7.6□□□□□ -1.19
CDC42-205ENST00000498236 C12orf65Q9H3J6 166 aaKnown RBP7.6□□□□□ -1.19
CDC42-205ENST00000498236 MANSC1Q9H8J5 431 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 CAB39LQ9H9S4 337 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 IL26Q9NPH9 171 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 RAD18Q9NS91 495 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 GTSE1Q9NYZ3 720 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 SUN2Q9UH99 717 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 MID2Q9UJV3 735 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 NUMBLQ9Y6R0 609 aa7.6□□□□□ -1.19
CDC42-205ENST00000498236 ZNF106Q9H2Y7 1883 aaKnown RBP7.6□□□□□ -1.19
CDC42-205ENST00000498236 MYO9BQ13459 2157 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 GLYATL1P3A0A0U1RQE8 302 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 C16orf96A6NNT2 1141 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 TARM1B6A8C7 271 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 H0Y858 1186 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 PSMD11O00231 422 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 GNB5O14775 395 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 PHGDHO43175 533 aaKnown RBP7.59□□□□□ -1.19
CDC42-205ENST00000498236 SNX3O60493 162 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 EDF1O60869 148 aaKnown RBP7.59□□□□□ -1.19
CDC42-205ENST00000498236 NDUFS3O75489 264 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 SRP72O76094 671 aaKnown RBP7.59□□□□□ -1.19
CDC42-205ENST00000498236 PRAMEF1O95521 474 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 TOP3BO95985 862 aaKnown RBP7.59□□□□□ -1.19
CDC42-205ENST00000498236 ESR1P03372 595 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 APODP05090 189 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 F7P08709 466 aaPredicted RBP7.59□□□□□ -1.19
CDC42-205ENST00000498236 ITGALP20701 1170 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 LHCGRP22888 699 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 ITGB7P26010 798 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 VIPR1P32241 457 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 SPAM1P38567 509 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 MMP12P39900 470 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 SPINT3P49223 89 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 PRKAA2P54646 552 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 CDKN2DP55273 166 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 IRF9Q00978 393 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 TIAL1Q01085 375 aaKnown RBP eCLIP7.59□□□□□ -1.19
CDC42-205ENST00000498236 NFATC2Q13469 925 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 SMAD4Q13485 552 aaKnown RBP7.59□□□□□ -1.19
CDC42-205ENST00000498236 FAM83EQ2M2I3 478 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 ZRANB3Q5FWF4 1079 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 WIPI1Q5MNZ9 446 aaPredicted RBP7.59□□□□□ -1.19
CDC42-205ENST00000498236 AGAP9Q5VTM2 703 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 ATG16L1Q676U5 607 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 LRRC66Q68CR7 880 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 RAPH1Q70E73 1250 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 DPPA4Q7L190 304 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 DSG4Q86SJ6 1040 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 TBC1D1Q86TI0 1168 aaPredicted RBP7.59□□□□□ -1.19
CDC42-205ENST00000498236 LDB1Q86U70 411 aaPredicted RBP7.59□□□□□ -1.19
CDC42-205ENST00000498236 TSPAN33Q86UF1 283 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 SPATS2Q86XZ4 545 aaKnown RBP7.59□□□□□ -1.19
CDC42-205ENST00000498236 PLD6Q8N2A8 252 aaKnown RBP7.59□□□□□ -1.19
CDC42-205ENST00000498236 PAF1Q8N7H5 531 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 OR6Y1Q8NGX8 325 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 TTC8Q8TAM2 541 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 MYLIPQ8WY64 445 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 KCNJ9Q92806 393 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 TSNARE1Q96NA8 513 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 BIRC8Q96P09 236 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 PSMG3-AS1Q96PY0 264 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 FERD3LQ96RJ6 166 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 OLFM1Q99784 485 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 MRPL57Q9BQC6 102 aaKnown RBP7.59□□□□□ -1.19
CDC42-205ENST00000498236 RPP25Q9BUL9 199 aaKnown RBP7.59□□□□□ -1.19
CDC42-205ENST00000498236 P2RY12Q9H244 342 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 NMRAL1Q9HBL8 299 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 BPIFA1Q9NP55 256 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 FGFR1OP2Q9NVK5 253 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 TAS2R13Q9NYV9 303 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 TMEM216Q9P0N5 145 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 COPG2Q9UBF2 871 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 B4GALT6Q9UBX8 382 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 PPT2Q9UMR5 302 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 MED16Q9Y2X0 877 aa7.59□□□□□ -1.19
CDC42-205ENST00000498236 PCDHB1Q9Y5F3 818 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms