RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ST6GALNAC2Q9UJ37 374 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TRMT6Q9UJA5 497 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 USP18Q9UMW8 372 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 PLCL2Q9UPR0 1127 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 MRPS2Q9Y399 296 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CLCA3PQ9Y6N3 262 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 RTL9Q8NET4 1388 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 A0A1W2PN81 502 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 A0A1W2PRV1 198 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 PRAMEF22A3QJZ6 481 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 VPS37CA5D8V6 355 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 FAM172BPA6NC97 362 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CCRL2O00421 344 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 KIAA0391O15091 583 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 LDLRAD4O15165 306 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 MATN3O15232 486 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 EIF3DO15371 548 aaKnown RBP eCLIP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 NUPL2O15504 423 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 AP5Z1O43299 807 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 AKR7A2O43488 359 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 MED7O43513 233 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 DNAJB6O75190 326 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 MTX2O75431 263 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 SPAG6O75602 509 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CLPXO76031 633 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ZBTB7AO95365 584 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 DIRAS3O95661 229 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 MBP02144 154 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 KRT8P05787 483 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 INHBAP08476 426 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CNPP09543 421 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 IL1R1P14778 569 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF28P17035 718 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 NCF2P19878 526 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 MX1P20591 662 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 NR2F2P24468 414 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CDC25AP30304 524 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CHRNA7P36544 502 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TALDO1P37837 337 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 HOXA1P49639 335 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 P2RY4P51582 365 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 MECP2P51608 486 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 RIDAP52758 137 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CACNA2D1P54289 1103 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CDH4P55283 916 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 PSMC6P62333 389 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 GNGT1P63211 74 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ATP2C1P98194 919 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF543Q08ER8 600 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 STX5Q13190 355 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 NFYCQ13952 458 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF268Q14587 947 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 PUM1Q14671 1186 aaKnown RBP eCLIP3.08□□□□□ -1.927e-6■□□□□ 10.1
SNRNP48-202ENST00000496946 PDK1Q15118 436 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 LTB4RQ15722 352 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CAMK4Q16566 473 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ADCK5Q3MIX3 580 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 FLYWCH1Q4VC44 716 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TIGD2Q4W5G0 525 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TRIM61Q5EBN2 209 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ATXN7L2Q5T6C5 722 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 FAM69AQ5T7M9 428 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ARMCX5Q6P1M9 558 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 C1orf94Q6P1W5 598 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 C5orf46Q6UWT4 87 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 RSPO2Q6UXX9 243 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 RNF207Q6ZRF8 634 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TOM1L2Q6ZVM7 507 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 LARP4Q71RC2 724 aaKnown RBP eCLIP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 KIF18BQ86Y91 864 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ARID3BQ8IVW6 561 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TSPYL6Q8N831 410 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 AKR7LQ8NHP1 331 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 NCOA7Q8NI08 942 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TCP10LQ8TDR4 215 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 IGDCC4Q8TDY8 1250 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 NAT14Q8WUY8 206 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 PROX1Q92786 737 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 RFT1Q96AA3 541 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 KIAA1143Q96AT1 154 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 PGM2Q96G03 612 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 PDLIM5Q96HC4 596 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 APOPT1Q96IL0 206 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 FEM1CQ96JP0 617 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ZIM3Q96PE6 472 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 P2RX7Q99572 595 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ELF4Q99607 663 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ZSCAN5AQ9BUG6 496 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TWSG1Q9GZX9 223 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 OR51B6Q9H340 312 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 SAV1Q9H4B6 383 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CAB39LQ9H9S4 337 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 PLGRKTQ9HBL7 147 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 SNX15Q9NRS6 342 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CNNM1Q9NRU3 951 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 KCNH7Q9NS40 1196 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TMEM184CQ9NVA4 438 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 NDE1Q9NXR1 346 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 TAB2Q9NYJ8 693 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 C5AR2Q9P296 337 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms