RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	ACVR1C	Q8NER5	493 aa		13.77	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PRSS33	Q8NF86	280 aa		13.77	□□□□□ -0.21
ATPAF2-208	ENST00000496852	OR56A4	Q8NGH8	313 aa		13.77	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SGF29	Q96ES7	293 aa		13.77	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SCARF2	Q96GP6	870 aa	Predicted RBP	13.77	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GPR22	Q99680	433 aa		13.77	□□□□□ -0.21
ATPAF2-208	ENST00000496852	AARSD1	Q9BTE6	412 aa	Known RBP	13.77	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TMBIM4	Q9HC24	238 aa		13.77	□□□□□ -0.21
ATPAF2-208	ENST00000496852	FGF22	Q9HCT0	170 aa		13.77	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GNPTG	Q9UJJ9	305 aa		13.77	□□□□□ -0.21
ATPAF2-208	ENST00000496852	MED16	Q9Y2X0	877 aa		13.77	□□□□□ -0.21
ATPAF2-208	ENST00000496852	MTO1	Q9Y2Z2	717 aa	Known RBP	13.77	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	13.77	□□□□□ -0.21
ATPAF2-208	ENST00000496852	COMMD10	Q9Y6G5	202 aa		13.77	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SPTY2D1-AS1	A0A0U1RR47	76 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852		A0A1B0GTW7	788 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	FAM95C	A0A1B0GW59	222 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	OR2AG2	A6NM03	316 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	QSOX1	O00391	747 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	VILL	O15195	856 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CNTF	P26441	200 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PRLHR	P49683	370 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GTF2H3	Q13889	308 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PTK2B	Q14289	1009 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	LGSN	Q5TDP6	509 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ZC3H14	Q6PJT7	736 aa	Known RBP	13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ENPP7	Q6UWV6	458 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ZNF547	Q8IVP9	402 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	RIBC1	Q8N443	379 aa	Predicted RBP	13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ARL8A	Q96BM9	186 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	NDN	Q99608	321 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	RMI1	Q9H9A7	625 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	MRPL40	Q9NQ50	206 aa	Known RBP	13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	NOVA2	Q9UNW9	492 aa	Known RBP	13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GPR34	Q9UPC5	381 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CACNA1H	O95180	2353 aa		13.76	□□□□□ -0.21
ATPAF2-208	ENST00000496852	IQANK1	A0A1B0GTG1	560 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PRSS38	A1L453	326 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	IQCF5	A8MTL0	148 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PRR5-ARHGAP8	B1AHC4	643 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852		H3BMM5	538 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TLR4	O00206	839 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	DLL1	O00548	723 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TNFRSF10C	O14798	259 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	NIPSNAP2	O75323	286 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	KRT38	O76015	456 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SYF2	O95926	243 aa	Known RBP	13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	OR56A5	P0C7T3	313 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	AFF3	P51826	1226 aa	Known RBP	13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	BMPR2	Q13873	1038 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	FZD2	Q14332	565 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	BCL7A	Q4VC05	210 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	FAM45BP	Q6NSW5	357 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TMEM220	Q6QAJ8	160 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TAOK1	Q7L7X3	1001 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SPATS2	Q86XZ4	545 aa	Known RBP	13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SYT12	Q8IV01	421 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	DCLK2	Q8N568	766 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GPATCH11	Q8N954	259 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	FAM45A	Q8TCE6	357 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	LKAAEAR1	Q8TD35	194 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	MZB1	Q8WU39	189 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	OR1E3	Q8WZA6	343 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PDXP	Q96GD0	296 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ZNF514	Q96K75	400 aa	Predicted RBP	13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CCDC68	Q9H2F9	335 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SUSD2	Q9UGT4	822 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	LGALS13	Q9UHV8	139 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GRID2	O43424	1007 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	MAGEC1	O60732	1142 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GNS	P15586	552 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CD9	P21926	228 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ATP5D	P30049	168 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	HOXD12	P35452	270 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	DPP6	P42658	865 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CSNK1E	P49674	416 aa	Known RBP	13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	NXPH1	P58417	271 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	EIF2B5	Q13144	721 aa	Known RBP	13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	MROH9	Q5TGP6	573 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	HECTD2	Q5U5R9	776 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PTRHD1	Q6GMV3	140 aa	Known RBP	13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	C11orf96	Q7Z7L8	435 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	LRRTM4	Q86VH4	590 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CYP4X1	Q8N118	509 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	KRT222	Q8N1A0	295 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	BEND7	Q8N7W2	519 aa	Predicted RBP	13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PIGK	Q92643	395 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	KCNJ9	Q92806	393 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	LOXL4	Q96JB6	756 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ELMO2	Q96JJ3	720 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	LINC00615	Q96LM1	132 aa	Predicted RBP	13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	OLFM1	Q99784	485 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	STMN4	Q9H169	189 aa	Predicted RBP	13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	KL	Q9UEF7	1012 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SUFU	Q9UMX1	484 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	VWA7	Q9Y334	891 aa		13.75	□□□□□ -0.21
ATPAF2-208	ENST00000496852	FOXO6	A8MYZ6	492 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	KRT37	O76014	449 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms