RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 GDF10P55107 478 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 PCBP4P57723 403 aaKnown RBP7.48□□□□□ -1.21
CDHR3-214ENST00000496633 RAB15P59190 212 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 BASP1P80723 227 aaKnown RBP7.48□□□□□ -1.21
CDHR3-214ENST00000496633 SNX1Q13596 522 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 SEPT6Q14141 434 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 PTPRRQ15256 657 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 TPSAB1Q15661 275 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 CYP1B1Q16678 543 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 PCID2Q5JVF3 399 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.48□□□□□ -1.21
CDHR3-214ENST00000496633 GPRC6AQ5T6X5 926 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 BROXQ5VW32 411 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 DENND5AQ6IQ26 1287 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 TMEM71Q6P5X7 295 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 AFTPHQ6ULP2 937 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 RFLNAQ6ZTI6 216 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 SDCCAG8Q86SQ7 713 aaPredicted RBP7.48□□□□□ -1.21
CDHR3-214ENST00000496633 TRIM74Q86UV6 250 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 LRRC6Q86X45 466 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 REXO1L1PQ8IX06 675 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 CARFQ8N187 725 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 NXPE1Q8N323 547 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 ZNF248Q8NDW4 579 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 OR2L2Q8NH16 312 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 SNIP1Q8TAD8 396 aaKnown RBP7.48□□□□□ -1.21
CDHR3-214ENST00000496633 HM13Q8TCT9 377 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 SLC37A2Q8TED4 501 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 C1orf54Q8WWF1 131 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 ATG4AQ8WYN0 398 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 CXorf40BQ96DE9 158 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 CDKN2AIPNLQ96HQ2 116 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 TEFMQ96QE5 360 aaKnown RBP7.48□□□□□ -1.21
CDHR3-214ENST00000496633 SMIM14Q96QK8 99 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 FAM118BQ9BPY3 351 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 ZPBPQ9BS86 351 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 ASPSCR1Q9BZE9 553 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 SYNDIG1Q9H7V2 258 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 C10orf88Q9H8K7 445 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 MRM3Q9HC36 420 aaKnown RBP7.48□□□□□ -1.21
CDHR3-214ENST00000496633 XAB2Q9HCS7 855 aaKnown RBP7.48□□□□□ -1.21
CDHR3-214ENST00000496633 CASS4Q9NQ75 786 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 ZDHHC3Q9NYG2 299 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 SNX12Q9UMY4 172 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 R3HDM2Q9Y2K5 976 aaKnown RBP7.48□□□□□ -1.21
CDHR3-214ENST00000496633 PCDHGA7Q9Y5G6 932 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 ENTPD2Q9Y5L3 495 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 OAS3Q9Y6K5 1087 aaKnown RBP7.48□□□□□ -1.21
CDHR3-214ENST00000496633 RNF215Q9Y6U7 377 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 EPG5Q9HCE0 2579 aa7.48□□□□□ -1.21
CDHR3-214ENST00000496633 SPEGQ15772 3267 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 ASPMQ8IZT6 3477 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 ZNF106Q9H2Y7 1883 aaKnown RBP7.47□□□□□ -1.21
CDHR3-214ENST00000496633 TRBV5-4A0A0C4DH59 114 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 TCRBV7S2A1N4TA0A589 114 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 CTAGE9A4FU28 777 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 FAM149AA5PLN7 773 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 A6NCN8 305 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 F5H423 210 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-214ENST00000496633 CCDC188H7C350 402 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 PLD2O14939 933 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 MAP3K7O43318 606 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 SNX2O60749 519 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 POP7O75817 140 aaKnown RBP7.47□□□□□ -1.21
CDHR3-214ENST00000496633 TOP3BO95985 862 aaKnown RBP7.47□□□□□ -1.21
CDHR3-214ENST00000496633 TUBB4AP04350 444 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 RPN2P04844 631 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 CELA2BP08218 269 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-214ENST00000496633 OR56A5P0C7T3 313 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 ACRV1P26436 265 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 CSTF2P33240 577 aaKnown RBP eCLIP7.47□□□□□ -1.21
CDHR3-214ENST00000496633 MAGEA6P43360 314 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 CD151P48509 253 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 PRLHRP49683 370 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 LIMK2P53671 638 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 GNG11P61952 73 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 GABREP78334 506 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 CCL7P80098 99 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 B4GALNT1Q00973 533 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 ZFP36L1Q07352 338 aaKnown RBP7.47□□□□□ -1.21
CDHR3-214ENST00000496633 CYP4F3Q08477 520 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 ILF2Q12905 390 aaKnown RBP7.47□□□□□ -1.21
CDHR3-214ENST00000496633 MSLNQ13421 630 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-214ENST00000496633 KRT33BQ14525 404 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 POU6F1Q14863 301 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 TBC1D25Q3MII6 688 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 FASTKD1Q53R41 847 aaKnown RBP7.47□□□□□ -1.21
CDHR3-214ENST00000496633 ZRANB3Q5FWF4 1079 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 PERM1Q5SV97 790 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 FNBP1LQ5T0N5 605 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 RNF187Q5TA31 235 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-214ENST00000496633 METRNLQ641Q3 311 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 MRNIPQ6NTE8 343 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 LRRC8BQ6P9F7 803 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 CCDC137Q6PK04 289 aaKnown RBP7.47□□□□□ -1.21
CDHR3-214ENST00000496633 TMEM220Q6QAJ8 160 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 CRTC3Q6UUV7 619 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 PACS1Q6VY07 963 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 RAB11FIP2Q7L804 512 aa7.47□□□□□ -1.21
CDHR3-214ENST00000496633 TAS2R42Q7RTR8 314 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms