RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 HRH2P25021 359 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 ACADLP28330 430 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 PPARGP37231 505 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-212ENST00000496458 ATP12AP54707 1039 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 MBTD1Q05BQ5 628 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 WDR38Q5JTN6 314 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 SFMBT2Q5VUG0 894 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 HIST3H2AQ7L7L0 130 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 GCSAMQ8N6F7 178 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 C1orf52Q8N6N3 182 aaKnown RBP5.32□□□□□ -1.56
SF3B1-212ENST00000496458 GSDMBQ8TAX9 411 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 F2RL3Q96RI0 385 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 JRKLQ9Y4A0 524 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 TMEM184BQ9Y519 407 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-212ENST00000496458 ARHGEF40Q8TER5 1519 aa5.32□□□□□ -1.56
SF3B1-212ENST00000496458 TDRD9Q8NDG6 1382 aaKnown RBP5.31□□□□□ -1.56
SF3B1-212ENST00000496458 A0A0G2JNG1 304 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 SMAD9O15198 467 aaKnown RBP5.31□□□□□ -1.56
SF3B1-212ENST00000496458 ZBTB43O43298 467 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 DDX58O95786 925 aaKnown RBP5.31□□□□□ -1.56
SF3B1-212ENST00000496458 CGAP01215 116 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 HSP90AA1P07900 732 aaKnown RBP5.31□□□□□ -1.56
SF3B1-212ENST00000496458 INHBAP08476 426 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 RARGP13631 454 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 TMEM11P17152 192 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 ARL3P36405 182 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 MSH2P43246 934 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 GPR143P51810 404 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 CTSCP53634 463 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 KIR2DS5Q14953 304 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 RAB6CQ53S08 254 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 WDR78Q5VTH9 848 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 SNX30Q5VWJ9 437 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 HACE1Q8IYU2 909 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 FAM9BQ8IZU0 186 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 STPG4Q8N801 248 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 RDM1Q8NG50 284 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 TRPC4APQ8TEL6 797 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 POMGNT1Q8WZA1 660 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 NUDCD1Q96RS6 583 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 RAB6CQ9H0N0 254 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 SH2D4AQ9H788 454 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 KRT84Q9NSB2 600 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 SMC4Q9NTJ3 1288 aa5.31□□□□□ -1.56
SF3B1-212ENST00000496458 A0A1W2PPI3 338 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 NTN3O00634 580 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-212ENST00000496458 CIDEAO60543 219 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 ZNF217O75362 1048 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 GPC4O75487 556 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 BMP10O95393 424 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 APOHP02749 345 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-212ENST00000496458 LAMP2P13473 410 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 HILS1P60008 231 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 MVPQ14764 893 aaKnown RBP5.3□□□□□ -1.56
SF3B1-212ENST00000496458 KIR2DS3Q14952 304 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 MAPRE1Q15691 268 aaKnown RBP5.3□□□□□ -1.56
SF3B1-212ENST00000496458 ASTE1Q2TB18 679 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-212ENST00000496458 PCGF3Q3KNV8 242 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 TMEM198Q66K66 360 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 KLHL35Q6PF15 583 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 SARM1Q6SZW1 724 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 PACS1Q6VY07 963 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 IKBIPQ70UQ0 350 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 ANO5Q75V66 913 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 FAM76AQ8TAV0 307 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 C17orf77Q96MU5 243 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 GAD1Q99259 594 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 GFI1Q99684 422 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 NCAPGQ9BPX3 1015 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 ITPAQ9BY32 194 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 PLK3Q9H4B4 646 aa5.3□□□□□ -1.56
SF3B1-212ENST00000496458 ZNF624Q9P2J8 865 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-212ENST00000496458 A8MZ25 164 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 SMIM1B2RUZ4 78 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 SYNCRIPO60506 623 aaKnown RBP5.29□□□□□ -1.56
SF3B1-212ENST00000496458 NR3C1P04150 777 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 TFAP2AP05549 437 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 LIPFP07098 398 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 TUBBP07437 444 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 TUBB4BP68371 445 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 LMOD3Q0VAK6 560 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 ASPRV1Q53RT3 343 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 TECRLQ5HYJ1 363 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 FAAH2Q6GMR7 532 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 ARHGAP11AQ6P4F7 1023 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 CFAP77Q6ZQR2 320 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 MPP4Q96JB8 637 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 CMTM3Q96MX0 182 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 SLX1AQ9BQ83 275 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 SEMA6AQ9H2E6 1030 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 BICC1Q9H694 974 aaKnown RBP5.29□□□□□ -1.56
SF3B1-212ENST00000496458 KAT14Q9H8E8 782 aa5.29□□□□□ -1.56
SF3B1-212ENST00000496458 DBNLQ9UJU6 430 aaKnown RBP5.29□□□□□ -1.56
SF3B1-212ENST00000496458 A0A087X0M5 115 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 A0A1B0GX30 115 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 BLOC1S5-TXNDC5H3BN57 136 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 TMEM189-UBE2V1I3L0A0 370 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 J3QR06 171 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 HS6ST1O60243 411 aa5.28□□□□□ -1.56
SF3B1-212ENST00000496458 CAVIN2O95810 425 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms