RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 CHST15Q7LFX5 561 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 MRGPREQ86SM8 312 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 TMEM200AQ86VY9 491 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 PRIMA1Q86XR5 153 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 TRIM48Q8IWZ4 208 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 LINC00301Q8NCQ3 95 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 DNAJB14Q8TBM8 379 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 RNF217Q8TC41 542 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 FNIP1Q8TF40 1166 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 ZNF606Q8WXB4 792 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 DTD2Q96FN9 168 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 ZNF514Q96K75 400 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 TBCBQ99426 244 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 UCK1Q9HA47 277 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 ZBTB20Q9HC78 741 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 TMEM248Q9NWD8 314 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 B4GALT6Q9UBX8 382 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 KCNK6Q9Y257 313 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 ACANP16112 2415 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 VPS13CQ709C8 3753 aa9.43□□□□□ -0.9
SMARCAL1-213ENST00000496037 CSPG4Q6UVK1 2322 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 A0A0U1RQS6 177 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 PCDH17O14917 1159 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 WIPF1O43516 503 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 ASMTLO95671 621 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 VIPP01282 170 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 EBLN1P0CF75 366 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 ESRRAP11474 423 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 FOLR1P15328 257 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 ETV3P41162 512 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 CA7P43166 264 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 GDF10P55107 478 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 CSNK1G2P78368 415 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 GCNT1Q02742 428 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 BCL2L1Q07817 233 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 CETN1Q12798 172 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 PAK1Q13153 545 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 TLR1Q15399 786 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 CNGA3Q16281 694 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 TMEM95Q3KNT9 176 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 GRAMD1BQ3KR37 738 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 ARTNQ5T4W7 220 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 FAAH2Q6GMR7 532 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 TMEM26Q6ZUK4 368 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 PHLDB2Q86SQ0 1253 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 TRIM74Q86UV6 250 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 NLRP14Q86W24 1093 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 FAM131BQ86XD5 332 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 PHYKPLQ8IUZ5 450 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 CELF2-AS1Q8N7Q2 184 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 ZNF397Q8NF99 534 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 RSC1A1Q92681 617 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 EAF1Q96JC9 268 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 MAGEB10Q96LZ2 347 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 LRFN5Q96NI6 719 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 GBP5Q96PP8 586 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 CBX8Q9HC52 389 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 DLL4Q9NR61 685 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 ACTR10Q9NZ32 417 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 UBA2Q9UBT2 640 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 RPH3AQ9Y2J0 694 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 FER1L5A0AVI2 2057 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 DOCK4Q8N1I0 1966 aa9.42□□□□□ -0.9
SMARCAL1-213ENST00000496037 ZGRF1Q86YA3 2104 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 JMJD1CQ15652 2540 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 C9J4A7 227 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 MEN1O00255 615 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 SLC16A3O15427 465 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 RRP9O43818 475 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 JCHAINP01591 159 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 ERBB2P04626 1255 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 ACP5P13686 325 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 RNF144AP50876 292 aaPredicted RBP9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 UBE2IP63279 158 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 FOLH1Q04609 750 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 RBPJQ06330 500 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 NCF4Q15080 339 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 SLC25A52Q3SY17 297 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 ZCWPW2Q504Y3 356 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 TM4SF20Q53R12 229 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 THNSL2Q86YJ6 484 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 PASD1Q8IV76 773 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 DSELQ8IZU8 1212 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 NUDT8Q8WV74 236 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 CPT1BQ92523 772 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 ECHDC3Q96DC8 303 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 TBC1D31Q96DN5 1066 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 CLIP3Q96DZ5 547 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 PAGE5Q96GU1 130 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 SLC41A2Q96JW4 573 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 GTPBP4Q9BZE4 634 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 OR12D3Q9UGF7 316 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 SLC30A1Q9Y6M5 507 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 NSD1Q96L73 2696 aaPredicted RBP9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 MYO7BQ6PIF6 2116 aa9.41□□□□□ -0.9
SMARCAL1-213ENST00000496037 MASP2O00187 686 aa9.4□□□□□ -0.9
SMARCAL1-213ENST00000496037 HEXIM1O94992 359 aaKnown RBP9.4□□□□□ -0.9
SMARCAL1-213ENST00000496037 UNC5CO95185 931 aa9.4□□□□□ -0.9
SMARCAL1-213ENST00000496037 VIPR1P32241 457 aa9.4□□□□□ -0.9
SMARCAL1-213ENST00000496037 GPC1P35052 558 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms