RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 SDCCAG8Q86SQ7 713 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-213ENST00000495232 NRROSQ86YC3 692 aa11.91□□□□□ -0.5
CSNK1E-213ENST00000495232 SLC35F3Q8IY50 421 aa11.91□□□□□ -0.5
CSNK1E-213ENST00000495232 PIANPQ8IYJ0 282 aa11.91□□□□□ -0.5
CSNK1E-213ENST00000495232 NAT6Q93015 286 aa11.91□□□□□ -0.5
CSNK1E-213ENST00000495232 ZNF669Q96BR6 464 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-213ENST00000495232 STAMBPL1Q96FJ0 436 aa11.91□□□□□ -0.5
CSNK1E-213ENST00000495232 NAT9Q9BTE0 207 aa11.91□□□□□ -0.5
CSNK1E-213ENST00000495232 SPATS2LQ9NUQ6 558 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-213ENST00000495232 WHRNQ9P202 907 aa11.91□□□□□ -0.5
CSNK1E-213ENST00000495232 PADI4Q9UM07 663 aa11.91□□□□□ -0.5
CSNK1E-213ENST00000495232 PCYT1BQ9Y5K3 369 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-213ENST00000495232 DNMT3AQ9Y6K1 912 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-213ENST00000495232 QSOX1O00391 747 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 NDUFS3O75489 264 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 RFPL3O75679 317 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 POP7O75817 140 aaKnown RBP11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 USP1O94782 785 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 TRIM16O95361 564 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 TTC4O95801 387 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 MYF5P13349 255 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 PGAM1P18669 254 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 IDSP22304 550 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 ACADVLP49748 655 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 CLCNKAP51800 687 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 CTSCP53634 463 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 CAV1Q03135 178 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 DHX9Q08211 1270 aaKnown RBP11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 DBN1Q16643 649 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 ANKRD20A4Q4UJ75 823 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 C14orf28Q4W4Y0 310 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 KIAA0930Q6ICG6 404 aaPredicted RBP11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 ZNF449Q6P9G9 518 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 OGFOD3Q6PK18 319 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 ERMP1Q7Z2K6 904 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 CCNJLQ8IV13 435 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 ZNF547Q8IVP9 402 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 PNPLA1Q8N8W4 532 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 KYQ8NBH2 561 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 GABPB2Q8TAK5 448 aaPredicted RBP11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 IFI44Q8TCB0 444 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 MAPK15Q8TD08 544 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 LRRC39Q96DD0 335 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 SIGLEC10Q96LC7 697 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 ABCG4Q9H172 646 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 STN1Q9H668 368 aaKnown RBP11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 PCDHGA1Q9Y5H4 931 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 ST14Q9Y5Y6 855 aa11.9□□□□□ -0.5
CSNK1E-213ENST00000495232 ZFC3H1O60293 1989 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 ARID1BQ8NFD5 2236 aaPredicted RBP11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 IGLV3-16A0A075B6K0 115 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 EME2A4GXA9 379 aaPredicted RBP11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 OR5K4A6NMS3 321 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 RHPN2P1A8MT19 583 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 PDZK1P1A8MUH7 402 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 ZW10O43264 779 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 AP2A2O94973 939 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 GP1BAP07359 652 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 OR56A5P0C7T3 313 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 GLB1P16278 677 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 HALP42357 657 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 B4GALNT1Q00973 533 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 E2F1Q01094 437 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 SEPT7Q16181 437 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 LONRF1Q17RB8 773 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 BCL7AQ4VC05 210 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 RNF187Q5TA31 235 aaPredicted RBP11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 N4BP2L1Q5TBK1 243 aaPredicted RBP11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 DUPD1Q68J44 220 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 GUSBP11Q6P575 273 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 PACS1Q6VY07 963 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 CENPUQ71F23 418 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 EFL1Q7Z2Z2 1120 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 TMEM135Q86UB9 458 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 SLCO6A1Q86UG4 719 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 BEND7Q8N7W2 519 aaPredicted RBP11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 GPR156Q8NFN8 814 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 OR2L2Q8NH16 312 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 EBNA1BP2Q99848 306 aaKnown RBP11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 CCM2Q9BSQ5 444 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 LRRC1Q9BTT6 524 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 TSSK1BQ9BXA7 367 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 FAM8A1Q9UBU6 413 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 TBC1D29Q9UFV1 150 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 SLC23A2Q9UGH3 650 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 VPS9D1Q9Y2B5 631 aa11.89□□□□□ -0.51
CSNK1E-213ENST00000495232 CNOT1A5YKK6 2376 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-213ENST00000495232 TRBV23OR9-2A0A075B6M9 112 aa11.88□□□□□ -0.51
CSNK1E-213ENST00000495232 UBA6A0AVT1 1052 aaPredicted RBP11.88□□□□□ -0.51
CSNK1E-213ENST00000495232 MGAT4DA6NG13 374 aa11.88□□□□□ -0.51
CSNK1E-213ENST00000495232 GOLGA8KD6RF30 607 aa11.88□□□□□ -0.51
CSNK1E-213ENST00000495232 GOLGA8TH3BQL2 631 aa11.88□□□□□ -0.51
CSNK1E-213ENST00000495232 NOBOXO60393 691 aa11.88□□□□□ -0.51
CSNK1E-213ENST00000495232 BANF1O75531 89 aa11.88□□□□□ -0.51
CSNK1E-213ENST00000495232 FTH1P02794 183 aa11.88□□□□□ -0.51
CSNK1E-213ENST00000495232 GSTM1P09488 218 aa11.88□□□□□ -0.51
CSNK1E-213ENST00000495232 F3P13726 295 aa11.88□□□□□ -0.51
CSNK1E-213ENST00000495232 RPL10P27635 214 aaKnown RBP11.88□□□□□ -0.51
CSNK1E-213ENST00000495232 PPM1FP49593 454 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms