RNA–Protein interactions for RNA: ENST00000494867.1

USP34-221, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 795 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-221ENST00000494867 TNFSF14O43557 240 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 MAGEA3P43357 314 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 CTSCP53634 463 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 ARL4CP56559 192 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 ACVR1Q04771 509 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 DNAJC3Q13217 504 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 LRP8Q14114 963 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 NR0B2Q15466 257 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 DBN1Q16643 649 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 GPR33Q49SQ1 333 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 AARS2Q5JTZ9 985 aaKnown RBP11.32□□□□□ -0.6
USP34-221ENST00000494867 DNTTIP2Q5QJE6 756 aaKnown RBP11.32□□□□□ -0.6
USP34-221ENST00000494867 HIBCHQ6NVY1 386 aaPredicted RBP11.32□□□□□ -0.6
USP34-221ENST00000494867 SDR16C5Q8N3Y7 309 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 FAM46DQ8NEK8 389 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 OR4L1Q8NH43 312 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 GPBAR1Q8TDU6 330 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 NAT14Q8WUY8 206 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 MFSD3Q96ES6 412 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 STAMBPL1Q96FJ0 436 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 APOLD1Q96LR9 279 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 COPS8Q99627 209 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 ERP44Q9BS26 406 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 KIFC1Q9BW19 673 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 DPEP2Q9H4A9 486 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 KLC4Q9NSK0 619 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 TREX1Q9NSU2 369 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 CATSPERZQ9NTU4 200 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 ZDHHC3Q9NYG2 299 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 TAAR2Q9P1P5 351 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 GULP1Q9UBP9 304 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 FAM8A1Q9UBU6 413 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 DNAJC16Q9Y2G8 782 aa11.32□□□□□ -0.6
USP34-221ENST00000494867 ASCC3Q8N3C0 2202 aaKnown RBP11.31□□□□□ -0.6
USP34-221ENST00000494867 TRBV5-4A0A0C4DH59 114 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 TPP1O14773 563 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 CHUKO15111 745 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 SNX2O60749 519 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 FTH1P19P0C7X4 201 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 GIMD1P0DJR0 217 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 MYF5P13349 255 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 ZNF7P17097 686 aaPredicted RBP11.31□□□□□ -0.6
USP34-221ENST00000494867 VCLP18206 1134 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 PSMA3P25788 255 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 DUSP3P51452 185 aaPredicted RBP11.31□□□□□ -0.6
USP34-221ENST00000494867 DHX9Q08211 1270 aaKnown RBP11.31□□□□□ -0.6
USP34-221ENST00000494867 BIRC2Q13490 618 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 ELOAQ14241 798 aaKnown RBP11.31□□□□□ -0.6
USP34-221ENST00000494867 HIF1AQ16665 826 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 FNBP1LQ5T0N5 605 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 KIAA0930Q6ICG6 404 aaPredicted RBP11.31□□□□□ -0.6
USP34-221ENST00000494867 LVRNQ6Q4G3 990 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 TMEM220Q6QAJ8 160 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 BPHLQ86WA6 291 aaPredicted RBP11.31□□□□□ -0.6
USP34-221ENST00000494867 NRROSQ86YC3 692 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 SLC35F3Q8IY50 421 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 PIANPQ8IYJ0 282 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 PDIK1LQ8N165 341 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 DEPDC4Q8N2C3 294 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 CEP112Q8N8E3 955 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 ARL10Q8N8L6 244 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 RASGEF1AQ8N9B8 481 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 ZDHHC1Q8WTX9 485 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 HEXDCQ8WVB3 486 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 CFAP36Q96G28 342 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 PWWP2AQ96N64 755 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 TTC1Q99614 292 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 OCSTAMPQ9BR26 566 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 TRIM56Q9BRZ2 755 aaKnown RBP11.31□□□□□ -0.6
USP34-221ENST00000494867 BOCQ9BWV1 1114 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 NCKIPSDQ9NZQ3 722 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 CHMP2BQ9UQN3 213 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 APOBEC2Q9Y235 224 aaKnown RBP11.31□□□□□ -0.6
USP34-221ENST00000494867 RPS6KL1Q9Y6S9 549 aa11.31□□□□□ -0.6
USP34-221ENST00000494867 GVINP1Q7Z2Y8 2422 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 FAM237BA0A1B0GVD1 139 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 CPED1A4D0V7 1026 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 GOLGA8KD6RF30 607 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 GOLGA8TH3BQL2 631 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 RFPL3O75679 317 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 USP1O94782 785 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 VAPBO95292 243 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 ATP1B2P14415 290 aaPredicted RBP11.3□□□□□ -0.6
USP34-221ENST00000494867 CKMT2P17540 419 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 PGAM1P18669 254 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 PMLP29590 882 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 PPARGP37231 505 aaPredicted RBP11.3□□□□□ -0.6
USP34-221ENST00000494867 RPIAP49247 311 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 ACADVLP49748 655 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 B4GALNT1Q00973 533 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 SLC7A5Q01650 507 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 THOC5Q13769 683 aaKnown RBP11.3□□□□□ -0.6
USP34-221ENST00000494867 ITIH4Q14624 930 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 SEPT7Q16181 437 aaKnown RBP11.3□□□□□ -0.6
USP34-221ENST00000494867 BCL7AQ4VC05 210 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 HP1BP3Q5SSJ5 553 aaPredicted RBP11.3□□□□□ -0.6
USP34-221ENST00000494867 LYPLAL1Q5VWZ2 237 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 ARMC3Q5W041 872 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 DUPD1Q68J44 220 aa11.3□□□□□ -0.6
USP34-221ENST00000494867 LDB1Q86U70 411 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms