RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 OR6P1Q8NGX9 317 aa15.68■□□□□ 0.1
LIME1-209ENST00000494776 HDAC10Q969S8 669 aa15.68■□□□□ 0.1
LIME1-209ENST00000494776 SH3KBP1Q96B97 665 aa15.68■□□□□ 0.1
LIME1-209ENST00000494776 NXPE2Q96DL1 559 aa15.68■□□□□ 0.1
LIME1-209ENST00000494776 TTC1Q99614 292 aa15.68■□□□□ 0.1
LIME1-209ENST00000494776 TMEM121BQ9BXQ6 578 aaPredicted RBP15.68■□□□□ 0.1
LIME1-209ENST00000494776 IL22Q9GZX6 179 aa15.68■□□□□ 0.1
LIME1-209ENST00000494776 CCDC86Q9H6F5 360 aaKnown RBP15.68■□□□□ 0.1
LIME1-209ENST00000494776 ZDHHC3Q9NYG2 299 aa15.68■□□□□ 0.1
LIME1-209ENST00000494776 KCNK4Q9NYG8 393 aa15.68■□□□□ 0.1
LIME1-209ENST00000494776 FAM8A1Q9UBU6 413 aa15.68■□□□□ 0.1
LIME1-209ENST00000494776 SLC2A6Q9UGQ3 507 aa15.68■□□□□ 0.1
LIME1-209ENST00000494776 ATXN7L1Q9ULK2 861 aaPredicted RBP15.68■□□□□ 0.1
LIME1-209ENST00000494776 PCDHB1Q9Y5F3 818 aa15.68■□□□□ 0.1
LIME1-209ENST00000494776 A0A1W2PQM1 296 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 TCRBV7S3A2A0A539 114 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 CCDC162PA2VCL2 907 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 OR51F1A6NGY5 319 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 AGAP14A8MT82 685 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 D6RAR5 112 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 PRSS56P0CW18 603 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 ATP1B2P14415 290 aaPredicted RBP15.67■□□□□ 0.1
LIME1-209ENST00000494776 CASQ1P31415 396 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 HALP42357 657 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 FASLGP48023 281 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 ARSDP51689 593 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 DRG2P55039 364 aaKnown RBP15.67■□□□□ 0.1
LIME1-209ENST00000494776 CRADDP78560 199 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 B4GALNT1Q00973 533 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 CYP4F3Q08477 520 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 MAP9Q49MG5 647 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 LRRC8BQ6P9F7 803 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 AFTPHQ6ULP2 937 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 ZNF438Q7Z4V0 828 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 C11orf96Q7Z7L8 435 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 BEND7Q8N7W2 519 aaPredicted RBP15.67■□□□□ 0.1
LIME1-209ENST00000494776 MDM1Q8TC05 714 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 NAT14Q8WUY8 206 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 ZCCHC14Q8WYQ9 949 aaKnown RBP15.67■□□□□ 0.1
LIME1-209ENST00000494776 GRAMD1AQ96CP6 724 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 AHCYL2Q96HN2 611 aaKnown RBP15.67■□□□□ 0.1
LIME1-209ENST00000494776 NRSN2Q9GZP1 204 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 DDX47Q9H0S4 455 aaKnown RBP15.67■□□□□ 0.1
LIME1-209ENST00000494776 SARS2Q9NP81 518 aaKnown RBP15.67■□□□□ 0.1
LIME1-209ENST00000494776 CHRAC1Q9NRG0 131 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 KCND1Q9NSA2 647 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 CPNE7Q9UBL6 633 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 ANAPC5Q9UJX4 755 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 RIMKLBQ9ULI2 386 aa15.67■□□□□ 0.1
LIME1-209ENST00000494776 PLXNB3Q9ULL4 1909 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 ZNF106Q9H2Y7 1883 aaKnown RBP15.66■□□□□ 0.1
LIME1-209ENST00000494776 TRBV5-4A0A0C4DH59 114 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 A6NCN8 305 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 TMX2-CTNND1H3BSU7 103 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 B4GAT1O43505 415 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 GOT2P00505 430 aaKnown RBP15.66■□□□□ 0.1
LIME1-209ENST00000494776 VIPP01282 170 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 MGAT1P26572 445 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 INHBCP55103 352 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 KCNJ11Q14654 390 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 BCL7AQ4VC05 210 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 FASTKD1Q53R41 847 aaKnown RBP15.66■□□□□ 0.1
LIME1-209ENST00000494776 MICALCLQ6ZW33 695 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 USP53Q70EK8 1073 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 PIM3Q86V86 326 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 ZNF761Q86XN6 746 aaPredicted RBP15.66■□□□□ 0.1
LIME1-209ENST00000494776 CREG2Q8IUH2 290 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 KLHL7Q8IXQ5 586 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 OR13J1Q8NGT2 312 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 PEX13Q92968 403 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 CXorf40BQ96DE9 158 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 ATXN7L3BQ96GX2 97 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 ZNF778Q96MU6 729 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 TMEM74Q96NL1 305 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.66■□□□□ 0.1
LIME1-209ENST00000494776 STRADBQ9C0K7 418 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 VPS37BQ9H9H4 285 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 ASIC3Q9UHC3 531 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 ENTPD2Q9Y5L3 495 aa15.66■□□□□ 0.1
LIME1-209ENST00000494776 MYLKQ15746 1914 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 ARHGEF17Q96PE2 2063 aaPredicted RBP15.65■□□□□ 0.1
LIME1-209ENST00000494776 KLHL33A6NCF5 533 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 MGAT4DA6NG13 374 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 GOLGA8MH3BSY2 632 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 CPNE6O95741 557 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 XRCC1P18887 633 aaPredicted RBP15.65■□□□□ 0.1
LIME1-209ENST00000494776 PSMA3P25788 255 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 PPARGP37231 505 aaPredicted RBP15.65■□□□□ 0.1
LIME1-209ENST00000494776 DMPKQ09013 629 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 NFE2L1Q14494 772 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 NR1D2Q14995 579 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 DBN1Q16643 649 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.65■□□□□ 0.1
LIME1-209ENST00000494776 AGAP9Q5VTM2 703 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 LYPLAL1Q5VWZ2 237 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 NKAIN2Q5VXU1 208 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 ANKRD22Q5VYY1 191 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 CASC4Q6P4E1 433 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 FOXR1Q6PIV2 292 aa15.65■□□□□ 0.1
LIME1-209ENST00000494776 ABRAXAS1Q6UWZ7 409 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms