RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 PPM1DO15297 605 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 KCNN4O15554 427 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 B4GAT1O43505 415 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 VEGFDO43915 354 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 ACP5P13686 325 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 SLC2A4P14672 509 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 ITPKBP27987 946 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 PSMB4P28070 264 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 ADRA1AP35348 466 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 SPAM1P38567 509 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 SQSTM1Q13501 440 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 CCNG2Q16589 344 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 DRICH1Q6PGQ1 229 aaPredicted RBP13.02□□□□□ -0.33
ERCC3-209ENST00000494464 DARS2Q6PI48 645 aaKnown RBP13.02□□□□□ -0.33
ERCC3-209ENST00000494464 RAB11FIP2Q7L804 512 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 ADGRG6Q86SQ4 1221 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 PDZD3Q86UT5 571 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 SPACA3Q8IXA5 215 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 BLOC1S5Q8TDH9 187 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 IFT81Q8WYA0 676 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 FAM118BQ9BPY3 351 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 TRIM51Q9BSJ1 452 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 FRMD8P1Q9BZ68 369 aaPredicted RBP13.02□□□□□ -0.33
ERCC3-209ENST00000494464 OR2AG1Q9H205 316 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 BPIFA1Q9NP55 256 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 MED4Q9NPJ6 270 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 TBC1D29Q9UFV1 150 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 FEZ2Q9UHY8 353 aaPredicted RBP13.02□□□□□ -0.33
ERCC3-209ENST00000494464 UNC13CQ8NB66 2214 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 IGHV1OR21-1A0A087WYE8 117 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 KIR2DS5A0A0G2JLQ3 304 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 A0A0G2JNG1 304 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 PRR19A6NJB7 356 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 OR5K4A6NMS3 321 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 KIR2DS3K7RE56 304 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 TNFSF15O95150 251 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 EML2O95834 649 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 F3P13726 295 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 ALDH4A1P30038 563 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 OR1D5P58170 312 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 GPLD1P80108 840 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 TLE3Q04726 772 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 PRPSAP1Q14558 356 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 KIR2DS5Q14953 304 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 ATP13A5Q4VNC0 1218 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.01□□□□□ -0.33
ERCC3-209ENST00000494464 RANBP10Q6VN20 620 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 TMPRSS9Q7Z410 1059 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 PIM3Q86V86 326 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 LRRTM4Q86VH4 590 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 FBXO39Q8N4B4 442 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 AVL9Q8NBF6 648 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 KCNE4Q8WWG9 221 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 LRRC45Q96CN5 670 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 CCDC97Q96F63 343 aaPredicted RBP13.01□□□□□ -0.33
ERCC3-209ENST00000494464 DPYSL5Q9BPU6 564 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 TIMM29Q9BSF4 260 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 FICDQ9BVA6 458 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 DPH1Q9BZG8 443 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 STN1Q9H668 368 aaKnown RBP13.01□□□□□ -0.33
ERCC3-209ENST00000494464 SARS2Q9NP81 518 aaKnown RBP13.01□□□□□ -0.33
ERCC3-209ENST00000494464 IL26Q9NPH9 171 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 SMOXQ9NWM0 555 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 RALYQ9UKM9 306 aaKnown RBP13.01□□□□□ -0.33
ERCC3-209ENST00000494464 TMPRSS11EQ9UL52 423 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 KCNK6Q9Y257 313 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 PKP3Q9Y446 797 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 PCDHGA7Q9Y5G6 932 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 LOC400499M0QZD8 3231 aa13.01□□□□□ -0.33
ERCC3-209ENST00000494464 GLYATL1P3A0A0U1RQE8 302 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 C5orf60A6NFR6 353 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 KMOO15229 486 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 GAS8O95995 478 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 CD1CP29017 333 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 UGT1A5P35504 534 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 HHEXQ03014 270 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 ITGA9Q13797 1035 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 PTK6Q13882 451 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 TAF1AQ15573 450 aaPredicted RBP13□□□□□ -0.33
ERCC3-209ENST00000494464 INSCQ1MX18 579 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 KHDC1Q4VXA5 237 aaKnown RBP13□□□□□ -0.33
ERCC3-209ENST00000494464 ZNF648Q5T619 568 aaPredicted RBP13□□□□□ -0.33
ERCC3-209ENST00000494464 IYDQ6PHW0 289 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 FOXR1Q6PIV2 292 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 DDHD1Q8NEL9 900 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 SLC35B2Q8TB61 432 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 CCDC110Q8TBZ0 833 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 BRSK1Q8TDC3 778 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 CRELD1Q96HD1 420 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 CMKLR1Q99788 373 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 C19orf43Q9BQ61 176 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 NUDT22Q9BRQ3 303 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 ZCCHC2Q9C0B9 1178 aaKnown RBP13□□□□□ -0.33
ERCC3-209ENST00000494464 RDH14Q9HBH5 336 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 ZDHHC18Q9NUE0 388 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 KCNK4Q9NYG8 393 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 ACSL6Q9UKU0 697 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 LOXL2Q9Y4K0 774 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 ZFYVE26Q68DK2 2539 aa13□□□□□ -0.33
ERCC3-209ENST00000494464 GAPDHSO14556 408 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms