RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 LRFN5Q96NI6 719 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 MAP3K3Q99759 626 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 TMEM121Q9BTD3 319 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 TUBB2BQ9BVA1 445 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 CINPQ9BW66 212 aaPredicted RBP6.66□□□□□ -1.34
FN1-225ENST00000494446 SLC7A5P2Q9GIP4 190 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 ENKD1Q9H0I2 346 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 CXXC4Q9H2H0 198 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 GRPEL1Q9HAV7 217 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 PDFQ9HBH1 243 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 DLL4Q9NR61 685 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 KLC4Q9NSK0 619 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 CCM2LQ9NUG4 571 aaPredicted RBP6.66□□□□□ -1.34
FN1-225ENST00000494446 P4HTMQ9NXG6 502 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 EPHA6Q9UF33 1036 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 BTRCQ9Y297 605 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 PADI2Q9Y2J8 665 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 PCDHGC4Q9Y5F7 938 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 VPS13CQ709C8 3753 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 UBA6A0AVT1 1052 aaPredicted RBP6.65□□□□□ -1.34
FN1-225ENST00000494446 PDZK1P1A8MUH7 402 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 P4HA2O15460 535 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 PRAMEF11O60813 436 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 LCA5LO95447 670 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 PFKFB1P16118 471 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 CTPS1P17812 591 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 RORAP35398 523 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 FOLR3P41439 243 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 PRCPP42785 496 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 PMS1P54277 932 aaKnown RBP6.65□□□□□ -1.34
FN1-225ENST00000494446 CASP6P55212 293 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 SOX8P57073 446 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 PLCL1Q15111 1095 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 CEBPEQ15744 281 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 CYP2A13Q16696 494 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 C15orf59Q2T9L4 293 aaPredicted RBP6.65□□□□□ -1.34
FN1-225ENST00000494446 PLA2G4EQ3MJ16 856 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 DNTTIP2Q5QJE6 756 aaKnown RBP6.65□□□□□ -1.34
FN1-225ENST00000494446 TMTC4Q5T4D3 741 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 AGAP7PQ5VUJ5 663 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 ZNF324BQ6AW86 544 aaPredicted RBP6.65□□□□□ -1.34
FN1-225ENST00000494446 CAVIN1Q6NZI2 390 aaKnown RBP6.65□□□□□ -1.34
FN1-225ENST00000494446 BIVMQ86UB2 503 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 GAS2L3Q86XJ1 694 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 KMT5CQ86Y97 462 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 PYROXD2Q8N2H3 581 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 D2HGDHQ8N465 521 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 CCDC185Q8N715 623 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 EMC1Q8N766 993 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 CATSPER1Q8NEC5 780 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 NUDT8Q8WV74 236 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 CPLX3Q8WVH0 158 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 CXorf40BQ96DE9 158 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 AGAP4Q96P64 663 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 RIOK2Q9BVS4 552 aaKnown RBP6.65□□□□□ -1.34
FN1-225ENST00000494446 SCAND2PQ9GZW5 306 aaPredicted RBP6.65□□□□□ -1.34
FN1-225ENST00000494446 RAB33BQ9H082 229 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 PDCL3Q9H2J4 239 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 EPS8L2Q9H6S3 715 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 ACTR5Q9H9F9 607 aaPredicted RBP6.65□□□□□ -1.34
FN1-225ENST00000494446 SLC40A1Q9NP59 571 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 PCMTD2Q9NV79 361 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 SOHLH2Q9NX45 425 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 VPS18Q9P253 973 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 SEMA5BQ9P283 1151 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 SEC14L3Q9UDX4 400 aa6.65□□□□□ -1.34
FN1-225ENST00000494446 GPN3Q9UHW5 284 aaPredicted RBP6.65□□□□□ -1.34
FN1-225ENST00000494446 PTRH2Q9Y3E5 179 aaKnown RBP6.65□□□□□ -1.34
FN1-225ENST00000494446 CPAMD8Q8IZJ3 1885 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.64□□□□□ -1.35
FN1-225ENST00000494446 A0A1W2PQ67 120 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 TLCD2A6NGC4 264 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 OR52A4PA6NMU1 304 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 WASH4PA8MWX3 477 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 ALOX12BO75342 701 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 KLF7O75840 302 aaPredicted RBP6.64□□□□□ -1.35
FN1-225ENST00000494446 PYGLP06737 847 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 CYP2A7P20853 494 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 AGXTP21549 392 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 RPL10P27635 214 aaKnown RBP6.64□□□□□ -1.35
FN1-225ENST00000494446 SCNN1AP37088 669 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 HADHAP40939 763 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 GABRB2P47870 512 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 PAPOLAP51003 745 aaKnown RBP6.64□□□□□ -1.35
FN1-225ENST00000494446 AP1S1P61966 158 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 RBPJQ06330 500 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 NSUN2Q08J23 767 aaKnown RBP eCLIP6.64□□□□□ -1.35
FN1-225ENST00000494446 ABRQ12979 859 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 AIMP2Q13155 320 aaKnown RBP6.64□□□□□ -1.35
FN1-225ENST00000494446 INSCQ1MX18 579 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.64□□□□□ -1.355e-27■■□□□ 11.5
FN1-225ENST00000494446 TDRD12Q587J7 1177 aaKnown RBP6.64□□□□□ -1.35
FN1-225ENST00000494446 IRAK1BP1Q5VVH5 260 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 RPUSD3Q6P087 351 aaKnown RBP6.64□□□□□ -1.35
FN1-225ENST00000494446 FBXO38Q6PIJ6 1188 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 IGFL2Q6UWQ7 119 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 CLEC9AQ6UXN8 241 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 TRIM72Q6ZMU5 477 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 LINC00696Q6ZRV3 163 aa6.64□□□□□ -1.35
FN1-225ENST00000494446 ENOSF1Q7L5Y1 443 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms