RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 INTS10Q9NVR2 710 aaKnown RBP14.37□□□□□ -0.11
BRCA1-223ENST00000494123 FBXO5Q9UKT4 447 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 GPR34Q9UPC5 381 aa14.37□□□□□ -0.11
BRCA1-223ENST00000494123 QSOX1O00391 747 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 PRMT5O14744 637 aaPredicted RBP14.36□□□□□ -0.11
BRCA1-223ENST00000494123 PIAS2O75928 621 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 AP2A2O94973 939 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 OR56A5P0C7T3 313 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 EPHA8P29322 1005 aaPredicted RBP14.36□□□□□ -0.11
BRCA1-223ENST00000494123 CTSCP53634 463 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 PMS2P54278 862 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 EIF3BP55884 814 aaKnown RBP14.36□□□□□ -0.11
BRCA1-223ENST00000494123 ILF3Q12906 894 aaKnown RBP eCLIP14.36□□□□□ -0.11
BRCA1-223ENST00000494123 ELOCQ15369 112 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 INSCQ1MX18 579 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 PLA2G4EQ3MJ16 856 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 TEDDM1Q5T9Z0 273 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 KIAA0408Q6ZU52 694 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 TRMT10CQ7L0Y3 403 aaKnown RBP14.36□□□□□ -0.11
BRCA1-223ENST00000494123 CNTN4Q8IWV2 1026 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 CLDN19Q8N6F1 224 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 LMX1AQ8TE12 382 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 FBF1Q8TES7 1133 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 LRRC61Q9BV99 259 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 TMEM168Q9H0V1 697 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 TMEM9BQ9NQ34 198 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 FBXO6Q9NRD1 293 aaPredicted RBP14.36□□□□□ -0.11
BRCA1-223ENST00000494123 TRNAU1APQ9NX07 287 aaKnown RBP14.36□□□□□ -0.11
BRCA1-223ENST00000494123 NSMCE4AQ9NXX6 385 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 GNPTGQ9UJJ9 305 aa14.36□□□□□ -0.11
BRCA1-223ENST00000494123 AQP9O43315 295 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 S1PR4O95977 384 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 ACP5P13686 325 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 VCLP18206 1134 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 TGM1P22735 817 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 MPP1Q00013 466 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 BNIP3Q12983 259 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 C1orf61Q13536 156 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 LRP8Q14114 963 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 NAA30Q147X3 362 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-223ENST00000494123 BCL7AQ4VC05 210 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 PTRHD1Q6GMV3 140 aaKnown RBP14.35□□□□□ -0.11
BRCA1-223ENST00000494123 ZNF449Q6P9G9 518 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 CYS1Q717R9 158 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 LRRC6Q86X45 466 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 CTAGE3PQ8IX95 158 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 FSTL5Q8N475 847 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-223ENST00000494123 BEND7Q8N7W2 519 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-223ENST00000494123 C2CD4AQ8NCU7 369 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-223ENST00000494123 ZNF548Q8NEK5 533 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-223ENST00000494123 LPGAT1Q92604 370 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 TSSK1BQ9BXA7 367 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 GSDMCQ9BYG8 508 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 CCDC68Q9H2F9 335 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 TM7SF3Q9NS93 570 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 TXNDC16Q9P2K2 825 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 SLC17A6Q9P2U8 582 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 DOLKQ9UPQ8 538 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 CRYL1Q9Y2S2 319 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 PCYT1BQ9Y5K3 369 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-223ENST00000494123 PRSS21Q9Y6M0 314 aa14.35□□□□□ -0.11
BRCA1-223ENST00000494123 NEMP2A6NFY4 417 aa14.34□□□□□ -0.11
BRCA1-223ENST00000494123 FTH1P02794 183 aa14.34□□□□□ -0.11
BRCA1-223ENST00000494123 F7P08709 466 aaPredicted RBP14.34□□□□□ -0.11
BRCA1-223ENST00000494123 RPS3P23396 243 aaKnown RBP eCLIP14.34□□□□□ -0.11
BRCA1-223ENST00000494123 PBLDP30039 288 aaPredicted RBP14.34□□□□□ -0.11
BRCA1-223ENST00000494123 FMO4P31512 558 aa14.34□□□□□ -0.11
BRCA1-223ENST00000494123 LEPRP48357 1165 aaKnown RBP14.34□□□□□ -0.11
BRCA1-223ENST00000494123 PRLHRP49683 370 aa14.34□□□□□ -0.11
BRCA1-223ENST00000494123 CTBSQ01459 385 aa14.34□□□□□ -0.11
BRCA1-223ENST00000494123 SUZ12Q15022 739 aaKnown RBP14.34□□□□□ -0.11
BRCA1-223ENST00000494123 SHBQ15464 509 aa14.34□□□□□ -0.11
BRCA1-223ENST00000494123 TAF8Q7Z7C8 310 aa14.34□□□□□ -0.11
BRCA1-223ENST00000494123 GKN2Q86XP6 184 aa14.34□□□□□ -0.11
BRCA1-223ENST00000494123 ZNF547Q8IVP9 402 aa14.34□□□□□ -0.11
BRCA1-223ENST00000494123 TIMM29Q9BSF4 260 aa14.34□□□□□ -0.11
BRCA1-223ENST00000494123 CAAP1Q9H8G2 361 aa14.34□□□□□ -0.11
BRCA1-223ENST00000494123 RXFP3Q9NSD7 469 aa14.34□□□□□ -0.11
BRCA1-223ENST00000494123 DNAAF2Q9NVR5 837 aaKnown RBP14.34□□□□□ -0.11
BRCA1-223ENST00000494123 PCDHB1Q9Y5F3 818 aa14.34□□□□□ -0.11
BRCA1-223ENST00000494123 FRYLO94915 3013 aa14.34□□□□□ -0.11
BRCA1-223ENST00000494123 EP300Q09472 2414 aaPredicted RBP14.34□□□□□ -0.11
BRCA1-223ENST00000494123 WDR87Q6ZQQ6 2873 aa14.34□□□□□ -0.11
BRCA1-223ENST00000494123 A0A087WUV0 522 aaPredicted RBP14.33□□□□□ -0.11
BRCA1-223ENST00000494123 POP7O75817 140 aaKnown RBP14.33□□□□□ -0.11
BRCA1-223ENST00000494123 HAUS5O94927 633 aa14.33□□□□□ -0.11
BRCA1-223ENST00000494123 ESR1P03372 595 aa14.33□□□□□ -0.11
BRCA1-223ENST00000494123 ZNF883P0CG24 379 aa14.33□□□□□ -0.11
BRCA1-223ENST00000494123 DGKAP23743 735 aa14.33□□□□□ -0.11
BRCA1-223ENST00000494123 UAP1L1Q3KQV9 507 aa14.33□□□□□ -0.11
BRCA1-223ENST00000494123 KBTBD12Q3ZCT8 623 aa14.33□□□□□ -0.11
BRCA1-223ENST00000494123 ZNF789Q5FWF6 425 aa14.33□□□□□ -0.11
BRCA1-223ENST00000494123 EMBQ6PCB8 327 aa14.33□□□□□ -0.11
BRCA1-223ENST00000494123 STRA8Q7Z7C7 330 aa14.33□□□□□ -0.11
BRCA1-223ENST00000494123 AMZ2Q86W34 360 aa14.33□□□□□ -0.11
BRCA1-223ENST00000494123 SLC26A11Q86WA9 606 aa14.33□□□□□ -0.11
BRCA1-223ENST00000494123 GATAD2AQ86YP4 633 aa14.33□□□□□ -0.11
BRCA1-223ENST00000494123 CYTH2Q99418 400 aa14.33□□□□□ -0.11
BRCA1-223ENST00000494123 P2RY12Q9H244 342 aa14.33□□□□□ -0.11
BRCA1-223ENST00000494123 OSGEPL1Q9H4B0 414 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms