RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 CCDC91Q7Z6B0 441 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 MAML2Q8IZL2 1156 aaPredicted RBP11.25□□□□□ -0.61
MCF2L-231ENST00000494043 KRT222Q8N1A0 295 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 BANPQ8N9N5 519 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 GIMAP7Q8NHV1 300 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 CD200R1Q8TD46 325 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 SNX19Q92543 992 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 FOXJ1Q92949 421 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 FAM136AQ96C01 138 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 SGF29Q96ES7 293 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 PANX3Q96QZ0 392 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 GPR21Q99679 349 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 APOOQ9BUR5 198 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 TSSK1BQ9BXA7 367 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 LGR4Q9BXB1 951 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 EPHX3Q9H6B9 360 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 ATXN10Q9UBB4 475 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 TRMT6Q9UJA5 497 aaKnown RBP11.25□□□□□ -0.61
MCF2L-231ENST00000494043 TLK1Q9UKI8 766 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 SMG5Q9UPR3 1016 aaKnown RBP11.25□□□□□ -0.61
MCF2L-231ENST00000494043 CA5BQ9Y2D0 317 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 ANKRD6Q9Y2G4 727 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 TMEM98Q9Y2Y6 226 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 HS3ST3A1Q9Y663 406 aa11.25□□□□□ -0.61
MCF2L-231ENST00000494043 ZDBF2Q9HCK1 2354 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 OR2AG2A6NM03 316 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 A6NNZ2 444 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 METTL12A8MUP2 240 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 GPR89AB7ZAQ6 455 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 CACNB4O00305 520 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-231ENST00000494043 COPEO14579 308 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 TOR1BO14657 336 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 PRPF4O43172 522 aaKnown RBP eCLIP11.24□□□□□ -0.612e-6■■■□□ 15.4
MCF2L-231ENST00000494043 MAP3K13O43283 966 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 TYROBPO43914 113 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 MAGEC1O60732 1142 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 SPAG7O75391 227 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 CDK14O94921 469 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 TRIM16O95361 564 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 ASMTLO95671 621 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 FTH1P02794 183 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 GPR89BP0CG08 455 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 ZNF37AP17032 561 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-231ENST00000494043 ZNF8P17098 575 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-231ENST00000494043 GMPRP36959 345 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 SKIV2L2P42285 1042 aaKnown RBP11.24□□□□□ -0.61
MCF2L-231ENST00000494043 PFN3P60673 137 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 PPP2R2AP63151 447 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 IRF9Q00978 393 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 NFATC4Q14934 902 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 DOK6Q6PKX4 331 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 MTERF4Q7Z6M4 381 aaKnown RBP11.24□□□□□ -0.61
MCF2L-231ENST00000494043 ABI3BPQ7Z7G0 1075 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 CLEC14AQ86T13 490 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 LONP2Q86WA8 852 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 SIDT2Q8NBJ9 832 aaKnown RBP11.24□□□□□ -0.61
MCF2L-231ENST00000494043 ZNF514Q96K75 400 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-231ENST00000494043 BMFQ96LC9 184 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 SLC30A3Q99726 388 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 SELENOSQ9BQE4 189 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 ORAI3Q9BRQ5 295 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 C1QTNF1Q9BXJ1 281 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 SLC13A1Q9BZW2 595 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 GPAMQ9HCL2 828 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 SARS2Q9NP81 518 aaKnown RBP11.24□□□□□ -0.61
MCF2L-231ENST00000494043 SPATS2LQ9NUQ6 558 aaKnown RBP11.24□□□□□ -0.61
MCF2L-231ENST00000494043 KLHL42Q9P2K6 505 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 GALPQ9UBC7 116 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 FBXO4Q9UKT5 387 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 ACOT9Q9Y305 439 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 DHRS7Q9Y394 339 aa11.24□□□□□ -0.61
MCF2L-231ENST00000494043 TMEM120BA0PK00 339 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 MEI4A8MW99 385 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 H0Y8X5 98 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 CHUKO15111 745 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 NUAK1O60285 661 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 LILRB5O75023 590 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 DNAJC6O75061 913 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 GLRA3O75311 464 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 TOP3BO95985 862 aaKnown RBP11.23□□□□□ -0.61
MCF2L-231ENST00000494043 GSTA1P08263 222 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 COL6A2P12110 1019 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 ITGB6P18564 788 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 CD27P26842 260 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 CRHR1P34998 444 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 SLC26A3P40879 764 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 YPEL5P62699 121 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 INSCQ1MX18 579 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 TMEM220Q6QAJ8 160 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 PAQR3Q6TCH7 311 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 TMEM207Q6UWW9 146 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 TBC1D1Q86TI0 1168 aaPredicted RBP11.23□□□□□ -0.61
MCF2L-231ENST00000494043 LCA5Q86VQ0 697 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 TRAPPC5Q8IUR0 188 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 SPNS2Q8IVW8 549 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 CENPLQ8N0S6 344 aaPredicted RBP11.23□□□□□ -0.61
MCF2L-231ENST00000494043 ZBTB2Q8N680 514 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 DEFB119Q8N690 84 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 KCTD4Q8WVF5 259 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 ANKRD49Q8WVL7 239 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms