RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 HGSO14964 777 aaPredicted RBP9.94□□□□□ -0.82
PRPF3-206ENST00000493553 CCL16O15467 120 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 KERAO60938 352 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 CBX6O95503 412 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 ATP6V1G2O95670 118 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 CD160O95971 181 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 TRBC1P01850 177 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 KRT16P08779 473 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 GLDCP23378 1020 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 MC4RP32245 332 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 RGRP47804 291 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 SGSHP51688 502 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 ALDH18A1P54886 795 aaKnown RBP9.94□□□□□ -0.82
PRPF3-206ENST00000493553 HERVK_113P63132 956 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 KCNJ2P63252 427 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 MXRA7P84157 204 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 LMAN2Q12907 356 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 SMAD1Q15797 465 aaKnown RBP9.94□□□□□ -0.82
PRPF3-206ENST00000493553 MYLK3Q32MK0 819 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 TRMT5Q32P41 509 aaKnown RBP9.94□□□□□ -0.82
PRPF3-206ENST00000493553 TTLL9Q3SXZ7 439 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 ZRANB3Q5FWF4 1079 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 PITRM1Q5JRX3 1037 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 RBM20Q5T481 1227 aaKnown RBP9.94□□□□□ -0.82
PRPF3-206ENST00000493553 PLPP4Q5VZY2 271 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 BRAT1Q6PJG6 821 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 NXPE4Q6UWF7 544 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 LINGO4Q6UY18 593 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 SNX20Q7Z614 316 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 TMCO2Q7Z6W1 182 aaPredicted RBP9.94□□□□□ -0.82
PRPF3-206ENST00000493553 LONP2Q86WA8 852 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 MFSD6LQ8IWD5 586 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 AHI1Q8N157 1196 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 CPSF7Q8N684 471 aaKnown RBP9.94□□□□□ -0.82
PRPF3-206ENST00000493553 CELF5Q8N6W0 485 aaKnown RBP9.94□□□□□ -0.82
PRPF3-206ENST00000493553 ACVR1CQ8NER5 493 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 OR13C4Q8NGS5 318 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 CEP70Q8NHQ1 597 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 ACTRT2Q8TDY3 377 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 PIH1D2Q8WWB5 315 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 PPP2R3CQ969Q6 453 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 OLFM1Q99784 485 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 CCDC106Q9BWC9 280 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 ERVK-6Q9BXR3 956 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 CLPBQ9H078 707 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 GSX1Q9H4S2 264 aaPredicted RBP9.94□□□□□ -0.82
PRPF3-206ENST00000493553 POMKQ9H5K3 350 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 MRPL40Q9NQ50 206 aaKnown RBP9.94□□□□□ -0.82
PRPF3-206ENST00000493553 MAN1C1Q9NR34 630 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 PNPOQ9NVS9 261 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 MARCH4Q9P2E8 410 aaPredicted RBP9.94□□□□□ -0.82
PRPF3-206ENST00000493553 BAIAP2L1Q9UHR4 511 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 GNPTGQ9UJJ9 305 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 CRYL1Q9Y2S2 319 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 KCTD3Q9Y597 815 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 SPO11Q9Y5K1 396 aa9.94□□□□□ -0.82
PRPF3-206ENST00000493553 TNPO3Q9Y5L0 923 aaKnown RBP9.94□□□□□ -0.82
PRPF3-206ENST00000493553 A8MT66 165 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 WASH3PC4AMC7 463 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 ZNF195O14628 629 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 GIPC1O14908 333 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 LYPLA1O75608 230 aaPredicted RBP9.93□□□□□ -0.82
PRPF3-206ENST00000493553 PAPLNO95428 1278 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 MLYCDO95822 493 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 CHEK2O96017 543 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 S100BP04271 92 aaPredicted RBP9.93□□□□□ -0.82
PRPF3-206ENST00000493553 RHOP08100 348 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 SRPRAP08240 638 aaKnown RBP9.93□□□□□ -0.82
PRPF3-206ENST00000493553 FGF4P08620 206 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 SBK3P0C264 359 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 CYP2A6P11509 494 aaPredicted RBP9.93□□□□□ -0.82
PRPF3-206ENST00000493553 PABPC1P11940 636 aaKnown RBP9.93□□□□□ -0.82
PRPF3-206ENST00000493553 CD1DP15813 335 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 ZNF30P17039 623 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 POLR2EP19388 210 aaKnown RBP9.93□□□□□ -0.82
PRPF3-206ENST00000493553 NCF2P19878 526 aaPredicted RBP9.93□□□□□ -0.82
PRPF3-206ENST00000493553 PGM1P36871 562 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 RAP1GDS1P52306 607 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 CDKN2DP55273 166 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 ERVFC1P60507 584 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 ECT2LQ008S8 904 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 CARD16Q5EG05 197 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 CDKL4Q5MAI5 379 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 C22orf39Q6P5X5 142 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 NAPRTQ6XQN6 538 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 TPRG1Q6ZUI0 275 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 FRMD7Q6ZUT3 714 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 TAS2R42Q7RTR8 314 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 ADAMTSL2Q86TH1 951 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 ISCA2Q86U28 154 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 CLYBLQ8N0X4 340 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 RYBPQ8N488 228 aaPredicted RBP9.93□□□□□ -0.82
PRPF3-206ENST00000493553 ZNF781Q8N8C0 355 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 KDM1BQ8NB78 822 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 MDGA1Q8NFP4 955 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 GIMAP7Q8NHV1 300 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 RP9Q8TA86 221 aaKnown RBP9.93□□□□□ -0.82
PRPF3-206ENST00000493553 GRIN3AQ8TCU5 1115 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 STMN2Q93045 179 aa9.93□□□□□ -0.82
PRPF3-206ENST00000493553 WBP2Q969T9 261 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms