RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ATG16L2Q8NAA4 619 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 IL17RCQ8NAC3 791 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 EVI5LQ96CN4 794 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 RNF183Q96D59 192 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 FBXO17Q96EF6 278 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 TEX13BQ9BXU2 312 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 RANBP17Q9H2T7 1088 aaKnown RBP3.2□□□□□ -1.9
PTCD3-218ENST00000493430 NYAP2Q9P242 653 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 GAB2Q9UQC2 676 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 LRCH1Q9Y2L9 728 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 SNX9Q9Y5X1 595 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 PATJQ8NI35 1801 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 HELZP42694 1942 aaKnown RBP3.2□□□□□ -1.9
PTCD3-218ENST00000493430 CEP192Q8TEP8 1941 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 CUL9Q8IWT3 2517 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 MYOFQ9NZM1 2061 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 COL6A3P12111 3177 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 GREB1Q4ZG55 1949 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 ANAPC1Q9H1A4 1944 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 KBTBD13C9JR72 458 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 E7EVH7 732 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 E7EWF7 191 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 DNM1LO00429 736 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 HBP1O60381 514 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 CLDN14O95500 239 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 ZFYP08048 801 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-218ENST00000493430 TOP1P11387 765 aaKnown RBP3.19□□□□□ -1.9
PTCD3-218ENST00000493430 CSF2RAP15509 400 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 CTPS1P17812 591 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 KCNA5P22460 613 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 PDIA3P30101 505 aaKnown RBP3.19□□□□□ -1.9
PTCD3-218ENST00000493430 PTPN9P43378 593 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 CENPAP49450 140 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 RPS6P62753 249 aaKnown RBP3.19□□□□□ -1.9
PTCD3-218ENST00000493430 CCNA1P78396 465 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 SLC18A2Q05940 514 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 GALNT1Q10472 559 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-218ENST00000493430 ACVR2BQ13705 512 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 ME3Q16798 604 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 CCSAPQ6IQ19 270 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-218ENST00000493430 LIN54Q6MZP7 749 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 DEFB128Q7Z7B8 93 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 TLK2Q86UE8 772 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 MON1AQ86VX9 555 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 CERS3Q8IU89 383 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 TDHQ8IZJ6 230 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 DEFB123Q8N688 67 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 SETD9Q8NE22 299 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 GMCL1P1Q8NEA9 526 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 KLHDC9Q8NEP7 349 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 LRRC8CQ8TDW0 803 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 YME1L1Q96TA2 773 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 ELAC2Q9BQ52 826 aaKnown RBP3.19□□□□□ -1.9
PTCD3-218ENST00000493430 MROH8Q9H579 483 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 JMJD4Q9H9V9 463 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 EBF2Q9HAK2 575 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 ARNT2Q9HBZ2 717 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 SPATS2LQ9NUQ6 558 aaKnown RBP3.19□□□□□ -1.9
PTCD3-218ENST00000493430 ANKRD10Q9NXR5 420 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 CYP39A1Q9NYL5 469 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 MTUS1Q9ULD2 1270 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 NYNRINQ9P2P1 1898 aaKnown RBP3.19□□□□□ -1.9
PTCD3-218ENST00000493430 NCOR1O75376 2440 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 SCN1AP35498 2009 aa3.19□□□□□ -1.9
PTCD3-218ENST00000493430 CPED1A4D0V7 1026 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 HMX3A6NHT5 357 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 H0Y3Z8 333 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 DDX39AO00148 427 aaKnown RBP3.18□□□□□ -1.9
PTCD3-218ENST00000493430 P2RY10O00398 339 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 SLC25A17O43808 307 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 ZBED4O75132 1171 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 KDM4BO94953 1096 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 SERPINC1P01008 464 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 LDLRP01130 860 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 CLTBP09497 229 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 CFC1BP0CG36 223 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 CFC1P0CG37 223 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 TNNT1P13805 278 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 MCM2P49736 904 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 DEFB103AP81534 67 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 TNFAIP2Q03169 654 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 ARHGAP1Q07960 439 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 GOLGA8FQ08AF8 430 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 ZBTB17Q13105 803 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 ARHGEF6Q15052 776 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 SMAD1Q15797 465 aaKnown RBP3.18□□□□□ -1.9
PTCD3-218ENST00000493430 SYT16Q17RD7 645 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 KIF26BQ2KJY2 2108 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 KRT71Q3SY84 523 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 XRRA1Q6P2D8 792 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 GJB7Q6PEY0 223 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 MFSD6Q6ZSS7 791 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 MARK2Q7KZI7 788 aaKnown RBP3.18□□□□□ -1.9
PTCD3-218ENST00000493430 SFR1Q86XK3 245 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 KLHDC8BQ8IXV7 354 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 GHDCQ8N2G8 530 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 ZNF441Q8N8Z8 693 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 OR6J1Q8NGC5 347 aa3.18□□□□□ -1.9
PTCD3-218ENST00000493430 OR6Y1Q8NGX8 325 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms