RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 SMARCAL1Q9NZC9 954 aa10.49□□□□□ -0.73
CDC42SE1-206ENST00000492796 SLC23A2Q9UGH3 650 aa10.49□□□□□ -0.73
CDC42SE1-206ENST00000492796 TCAF1Q9Y4C2 921 aa10.49□□□□□ -0.73
CDC42SE1-206ENST00000492796 PCDHB1Q9Y5F3 818 aa10.49□□□□□ -0.73
CDC42SE1-206ENST00000492796 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.49□□□□□ -0.731e-16■■■□□ 15.5
CDC42SE1-206ENST00000492796 ZFHX4Q86UP3 3567 aa10.49□□□□□ -0.73
CDC42SE1-206ENST00000492796 MAP1BP46821 2468 aaKnown RBP10.49□□□□□ -0.73
CDC42SE1-206ENST00000492796 RP1P56715 2156 aa10.49□□□□□ -0.73
CDC42SE1-206ENST00000492796 ASXL3Q9C0F0 2248 aa10.49□□□□□ -0.73
CDC42SE1-206ENST00000492796 SPEGQ15772 3267 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 IGLV3-16A0A075B6K0 115 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 CTAGE9A4FU28 777 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 OR2AG2A6NM03 316 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 PDZK1P1A8MUH7 402 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 CCL22O00626 93 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 ZNF185O15231 689 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 PPM1DO15297 605 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 POP7O75817 140 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 CPNE6O95741 557 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 CAPNS1P04632 268 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 XRCC1P18887 633 aaPredicted RBP10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 CCKBRP32239 447 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 NPY2RP49146 381 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 PRLHRP49683 370 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 EPHA4P54764 986 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 ACVR1Q04771 509 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 GPS1Q13098 491 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 EIF3IQ13347 325 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 ITIH4Q14624 930 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 KCNJ11Q14654 390 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 TRIP13Q15645 432 aaPredicted RBP10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 ST3GAL2Q16842 350 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 MAP9Q49MG5 647 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 CCDC38Q502W7 563 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 PCID2Q5JVF3 399 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 FNBP1LQ5T0N5 605 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 TSTD2Q5T7W7 516 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 LRRC8BQ6P9F7 803 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 TMEM220Q6QAJ8 160 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 AFTPHQ6ULP2 937 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 ABRAXAS1Q6UWZ7 409 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 Q8N9G6 341 aaPredicted RBP10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 OR13J1Q8NGT2 312 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 LIN37Q96GY3 246 aaPredicted RBP10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 SLC38A3Q99624 504 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 DPYSL5Q9BPU6 564 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 STRADBQ9C0K7 418 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 FAM96AQ9H5X1 160 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 VPS37BQ9H9H4 285 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 UCK1Q9HA47 277 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 PRDM8Q9NQV8 689 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 POT1Q9NUX5 634 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 KCNK4Q9NYG8 393 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 BFARQ9NZS9 450 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 DNAJC16Q9Y2G8 782 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 ENTPD2Q9Y5L3 495 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 SAR1BQ9Y6B6 198 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 CHD6Q8TD26 2715 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 ASPMQ8IZT6 3477 aa10.48□□□□□ -0.73
CDC42SE1-206ENST00000492796 CHD8Q9HCK8 2581 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 AKAP13Q12802 2813 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 IGHV1OR21-1A0A087WYE8 117 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 CCDC187A0A096LP49 1063 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 MGAT4DA6NG13 374 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 LILRA5A6NI73 299 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 QSOX1O00391 747 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 DUX1O43812 170 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 AP2A2O94973 939 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 GSTM1P09488 218 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 ATP1B2P14415 290 aaPredicted RBP10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 ALDH4A1P30038 563 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 FOXN2P32314 431 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 HALP42357 657 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 MLLT3P42568 568 aaPredicted RBP10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 NSG1P42857 185 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 VPS41P49754 854 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 ARSDP51689 593 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 INHBCP55103 352 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 OR1D5P58170 312 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 UBE2IP63279 158 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 GSTM4Q03013 218 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 SQSTM1Q13501 440 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 SEPT7Q16181 437 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 LYPLAL1Q5VWZ2 237 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 IGF2-ASQ6U949 168 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 PACS1Q6VY07 963 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 ZNF534Q76KX8 674 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 DET1Q7L5Y6 550 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 TAS2R42Q7RTR8 314 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 PIM3Q86V86 326 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 SERPINA9Q86WD7 417 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 PROSER1Q86XN7 944 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 RBM12BQ8IXT5 1001 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 LSMEM2Q8N112 164 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 OR2L2Q8NH16 312 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 WDR36Q8NI36 951 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 MDM1Q8TC05 714 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 SLCO2A1Q92959 643 aa10.47□□□□□ -0.73
CDC42SE1-206ENST00000492796 SGF29Q96ES7 293 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms