RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 PCDHGB1Q9Y5G3 927 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 PCDHAC2Q9Y5I4 1007 aa3.87□□□□□ -1.79
CLK1-213ENST00000492793 IGKV2D-30A0A075B6S6 120 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 NDUFS4O43181 175 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 PLOD3O60568 738 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 DIAPH2O60879 1101 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 DDNO94850 711 aaPredicted RBP3.86□□□□□ -1.79
CLK1-213ENST00000492793 TPOP07202 933 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 PRLRP16471 622 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 ITGA2P17301 1181 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 KCNA5P22460 613 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 DNASE1P24855 282 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 USP8P40818 1118 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 NANOS2P60321 138 aaKnown RBP3.86□□□□□ -1.79
CLK1-213ENST00000492793 RELQ04864 619 aaPredicted RBP3.86□□□□□ -1.79
CLK1-213ENST00000492793 SPOCK1Q08629 439 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 AIMP1Q12904 312 aaKnown RBP3.86□□□□□ -1.79
CLK1-213ENST00000492793 GRAPQ13588 217 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 GTF2H2Q13888 395 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 MVPQ14764 893 aaKnown RBP3.86□□□□□ -1.79
CLK1-213ENST00000492793 KIF19Q2TAC6 998 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 LETM2Q2VYF4 491 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 KRT79Q5XKE5 535 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 DHRS7BQ6IAN0 325 aaPredicted RBP3.86□□□□□ -1.79
CLK1-213ENST00000492793 GTF2H2CQ6P1K8 395 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 UNQ6126/PRO20091Q6UXV3 157 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 LDB1Q86U70 411 aaPredicted RBP3.86□□□□□ -1.79
CLK1-213ENST00000492793 GBGT1Q8N5D6 347 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 MINDY1Q8N5J2 469 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 GCSAMQ8N6F7 178 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 C1orf52Q8N6N3 182 aaKnown RBP3.86□□□□□ -1.79
CLK1-213ENST00000492793 Q8N9P0 234 aaPredicted RBP3.86□□□□□ -1.79
CLK1-213ENST00000492793 ZFAND2BQ8WV99 257 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 LPGAT1Q92604 370 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 SEMA4DQ92854 862 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 TMCO6Q96DC7 493 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 ERLEC1Q96DZ1 483 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 OXNAD1Q96HP4 312 aaPredicted RBP3.86□□□□□ -1.79
CLK1-213ENST00000492793 IGSF21Q96ID5 467 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 MRPL1Q9BYD6 325 aaKnown RBP3.86□□□□□ -1.79
CLK1-213ENST00000492793 TXLNGYQ9BZA5 131 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 SLCO5A1Q9H2Y9 848 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 KCNK15Q9H427 330 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 UBTD1Q9HAC8 227 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 TRPV2Q9Y5S1 764 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 PASKQ96RG2 1323 aa3.86□□□□□ -1.79
CLK1-213ENST00000492793 LOC102723996A0A087X1L8 192 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 GPR75-ASB3A0A0A6YYF3 556 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 MAGEA13PA6NCF6 341 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 OR5K3A6NET4 321 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 TSPY2A6NKD2 308 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 SRRM3A6NNA2 597 aaPredicted RBP3.85□□□□□ -1.79
CLK1-213ENST00000492793 PROB1E7EW31 1015 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 ZNHIT1O43257 154 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 CAMTA2O94983 1202 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 BMP10O95393 424 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 APOA4P06727 396 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 TSPY3P0CV98 308 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 TSPY8P0CW00 308 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 CDH1P12830 882 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 PLA2G2AP14555 144 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 PSMC4P43686 418 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 CTSCP53634 463 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 FOXG1P55316 489 aaPredicted RBP3.85□□□□□ -1.79
CLK1-213ENST00000492793 TSPY1Q01534 308 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 CXCL9Q07325 125 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 SNAPC1Q16533 368 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 C6orf163Q5TEZ5 329 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 ADALQ6DHV7 355 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 TMEM211Q6ICI0 200 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 LCN10Q6JVE6 187 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 TRNP1Q6NT89 227 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 ZNF534Q76KX8 674 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 TMEM219Q86XT9 240 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 KMT5CQ86Y97 462 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.85□□□□□ -1.79
CLK1-213ENST00000492793 C1orf87Q8N0U7 546 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 GUF1Q8N442 669 aaKnown RBP3.85□□□□□ -1.79
CLK1-213ENST00000492793 AFAP1Q8N556 730 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 ZNF441Q8N8Z8 693 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 ZBTB8BQ8NAP8 495 aaPredicted RBP3.85□□□□□ -1.79
CLK1-213ENST00000492793 SLC38A9Q8NBW4 561 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 CCDC191Q8NCU4 936 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 SPATA22Q8NHS9 363 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 SNRNP27Q8WVK2 155 aaKnown RBP3.85□□□□□ -1.79
CLK1-213ENST00000492793 SECTM1Q8WVN6 248 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 ZNF622Q969S3 477 aaKnown RBP eCLIP3.85□□□□□ -1.792e-16■■■■□ 20.9
CLK1-213ENST00000492793 PHF21AQ96BD5 680 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 CNDP2Q96KP4 475 aaKnown RBP3.85□□□□□ -1.79
CLK1-213ENST00000492793 FAM81BQ96LP2 452 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 DACH2Q96NX9 599 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 GFI1Q99684 422 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 NEURL2Q9BR09 285 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 SYT17Q9BSW7 474 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 C1QTNF4Q9BXJ3 329 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 CSTL1Q9H114 145 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 MMP27Q9H306 513 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 DENND2DQ9H6A0 471 aaPredicted RBP3.85□□□□□ -1.79
CLK1-213ENST00000492793 TCP11L1Q9NUJ3 509 aa3.85□□□□□ -1.79
CLK1-213ENST00000492793 RCC2Q9P258 522 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms