RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 IGSF11Q5DX21 431 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 EEF1A1P5Q5VTE0 462 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 GPR139Q6DWJ6 353 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 CAPRIN2Q6IMN6 1127 aaKnown RBP3.8□□□□□ -1.8
VTA1-204ENST00000491881 PRSS57Q6UWY2 283 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 GFRALQ6UXV0 394 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 ZNF704Q6ZNC4 412 aaPredicted RBP3.8□□□□□ -1.8
VTA1-204ENST00000491881 AACSQ86V21 672 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 TMEM219Q86XT9 240 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 KMT5CQ86Y97 462 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 GCSAMQ8N6F7 178 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 ZNF441Q8N8Z8 693 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 SLC38A9Q8NBW4 561 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 LRRC59Q96AG4 307 aaKnown RBP3.8□□□□□ -1.8
VTA1-204ENST00000491881 SLC22A18Q96BI1 424 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 DACH2Q96NX9 599 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 SYT17Q9BSW7 474 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 LRMDAQ9H2I8 198 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 CHMP1AQ9HD42 196 aaPredicted RBP3.8□□□□□ -1.8
VTA1-204ENST00000491881 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.8□□□□□ -1.8
VTA1-204ENST00000491881 TMEM30AQ9NV96 361 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 PPIEQ9UNP9 301 aaKnown RBP3.8□□□□□ -1.8
VTA1-204ENST00000491881 ZNF148Q9UQR1 794 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 OR2W1Q9Y3N9 320 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 TTLL3Q9Y4R7 772 aa3.8□□□□□ -1.8
VTA1-204ENST00000491881 GLOD5A6NK44 160 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 A6NL46 340 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 ZNF587BE7ETH6 402 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 TMEM178BH3BS89 294 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 J3QR06 171 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 NDUFS4O43181 175 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 ZNHIT1O43257 154 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 BUD23O43709 281 aaKnown RBP3.79□□□□□ -1.8
VTA1-204ENST00000491881 ZNF217O75362 1048 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 PGM3O95394 542 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 FAM106CPP0CH98 169 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 CDH1P12830 882 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 GJA1P17302 382 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 NMBRP28336 390 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 CD81P60033 236 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 CXCL9Q07325 125 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 COASYQ13057 564 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 GTF2H2Q13888 395 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 BECN1Q14457 450 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 KCTD2Q14681 263 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 FAM98BQ52LJ0 330 aaKnown RBP3.79□□□□□ -1.8
VTA1-204ENST00000491881 BMP2KLQ5H9B9 411 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 KRT79Q5XKE5 535 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 GTF2H2CQ6P1K8 395 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 SPSB3Q6PJ21 355 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 C16orf54Q6UWD8 224 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 TMCO3Q6UWJ1 677 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.79□□□□□ -1.8
VTA1-204ENST00000491881 PLEKHM3Q6ZWE6 761 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 TUBA1AQ71U36 451 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 GALNT5Q7Z7M9 940 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 RBM23Q86U06 439 aaKnown RBP3.79□□□□□ -1.8
VTA1-204ENST00000491881 SATL1Q86VE3 508 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 TMPRSS12Q86WS5 348 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 DNAAF5Q86Y56 855 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 GALNT13Q8IUC8 556 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 CEP97Q8IW35 865 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.79□□□□□ -1.8
VTA1-204ENST00000491881 SCML4Q8N228 414 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 C1orf52Q8N6N3 182 aaKnown RBP3.79□□□□□ -1.8
VTA1-204ENST00000491881 LMO3Q8TAP4 145 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 TMEM255BQ8WV15 326 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 NEUROD6Q96NK8 337 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 TUBA1CQ9BQE3 449 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 SLF1Q9BQI6 1058 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 NEURL2Q9BR09 285 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 APOL6Q9BWW8 343 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 MRPL1Q9BYD6 325 aaKnown RBP3.79□□□□□ -1.8
VTA1-204ENST00000491881 CSTL1Q9H114 145 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 RETREG1Q9H6L5 497 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 DDX31Q9H8H2 851 aaKnown RBP3.79□□□□□ -1.8
VTA1-204ENST00000491881 TRMT1Q9NXH9 659 aaKnown RBP3.79□□□□□ -1.8
VTA1-204ENST00000491881 WSB2Q9NYS7 404 aaPredicted RBP3.79□□□□□ -1.8
VTA1-204ENST00000491881 AMACRQ9UHK6 382 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 TSPYL4Q9UJ04 414 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 HACL1Q9UJ83 578 aa3.79□□□□□ -1.8
VTA1-204ENST00000491881 MAGED1Q9Y5V3 778 aaPredicted RBP3.79□□□□□ -1.8
VTA1-204ENST00000491881 CGNL1Q0VF96 1302 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 PASKQ96RG2 1323 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 A0A1W2PP11 408 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 OR5K3A6NET4 321 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 SMTNL1A8MU46 457 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 ANKRD66B4E2M5 251 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 EIF3DO15371 548 aaKnown RBP eCLIP3.78□□□□□ -1.8
VTA1-204ENST00000491881 WDR1O75083 606 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 ERAL1O75616 437 aaKnown RBP3.78□□□□□ -1.8
VTA1-204ENST00000491881 SNRNP70P08621 437 aaKnown RBP3.78□□□□□ -1.8
VTA1-204ENST00000491881 HLA-DOBP13765 273 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 PRLRP16471 622 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 HSD17B4P51659 736 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 TERF1P54274 439 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 SNRPEP62304 92 aaKnown RBP3.78□□□□□ -1.8
VTA1-204ENST00000491881 IFI35P80217 286 aaPredicted RBP3.78□□□□□ -1.8
VTA1-204ENST00000491881 EEF1A2Q05639 463 aaKnown RBP3.78□□□□□ -1.8
VTA1-204ENST00000491881 OR7E24Q6IFN5 339 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms