RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 RAPGEFL1Q9UHV5 662 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 EIF2B4Q9UI10 523 aaKnown RBP21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 TMEM98Q9Y2Y6 226 aa21.46■■□□□ 1.03
VCPKMT-204ENST00000491402 OR2AG2A6NM03 316 aa21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 H3BMM5 538 aa21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 CACNB4O00305 520 aaPredicted RBP21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 RFPL1O75677 317 aa21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 ASMTLO95671 621 aa21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 OR56A5P0C7T3 313 aa21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 STMN1P16949 149 aa21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 FDXRP22570 491 aa21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 PGGT1BP53609 377 aa21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 CTSCP53634 463 aa21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 SLC12A2P55011 1212 aa21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 TIAL1Q01085 375 aaKnown RBP eCLIP21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 PDE1CQ14123 709 aaPredicted RBP21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 ZKSCAN8Q15776 578 aaPredicted RBP21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 TTMPQ5BVD1 217 aa21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 AGBL2Q5U5Z8 902 aa21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 DOK6Q6PKX4 331 aa21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 CEP97Q8IW35 865 aa21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 SRRM1Q8IYB3 904 aaKnown RBP21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 FAM136AQ96C01 138 aa21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 NOVA2Q9UNW9 492 aaKnown RBP21.45■■□□□ 1.02
VCPKMT-204ENST00000491402 A6NNZ2 444 aa21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 E5RI56 91 aa21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 RHOBTB1O94844 696 aa21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 AP2A2O94973 939 aa21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 MT-ND3P03897 115 aa21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 HOXC4P09017 264 aaPredicted RBP21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 ZNF8P17098 575 aaPredicted RBP21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 TYK2P29597 1187 aa21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 MAGEA12P43365 314 aa21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 DHPSP49366 369 aaPredicted RBP21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 KIAA1024LP59773 190 aa21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 RAB10P61026 200 aa21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 GTF2H3Q13889 308 aa21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 KCTD16Q68DU8 428 aa21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 PIM3Q86V86 326 aa21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 ATP6V1G3Q96LB4 118 aa21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 SLC6A18Q96N87 628 aa21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 TAS2R13Q9NYV9 303 aa21.44■■□□□ 1.02
VCPKMT-204ENST00000491402 QSOX1O00391 747 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 CHRM3P20309 590 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 MAOBP27338 520 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 RABIFP47224 123 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 CSRP3P50461 194 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 YPEL5P62699 121 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 GPS2Q13227 327 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 ZNF460Q14592 562 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 KRT222Q8N1A0 295 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 LKAAEAR1Q8TD35 194 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 TLCD1Q96CP7 247 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 TSPAN17Q96FV3 270 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 MED4Q9NPJ6 270 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 GPR179Q6PRD1 2367 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 TMEM202A6NGA9 273 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 GOLGA8RI6L899 631 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 TOR1BO14657 336 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 PHGDHO43175 533 aaKnown RBP21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 VPS26AO75436 327 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 KRT4P19013 534 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 CD9P21926 228 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 PRLHRP49683 370 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 NFATC4Q14934 902 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 HSP90B2PQ58FF3 399 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 TMEM220Q6QAJ8 160 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 Q6ZSR6 202 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 EXOC3L1Q86VI1 746 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 BEND7Q8N7W2 519 aaPredicted RBP21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 OR13H1Q8NG92 308 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 DNASE2BQ8WZ79 361 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 PANX3Q96QZ0 392 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 GPR21Q99679 349 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 AASDHPPTQ9NRN7 309 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 SENP1Q9P0U3 644 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 SLC17A4Q9Y2C5 497 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 FRYLO94915 3013 aa21.43■■□□□ 1.02
VCPKMT-204ENST00000491402 GPR89AB7ZAQ6 455 aa21.42■■□□□ 1.02
VCPKMT-204ENST00000491402 NUAK1O60285 661 aa21.42■■□□□ 1.02
VCPKMT-204ENST00000491402 TRIM16O95361 564 aa21.42■■□□□ 1.02
VCPKMT-204ENST00000491402 GPR89BP0CG08 455 aa21.42■■□□□ 1.02
VCPKMT-204ENST00000491402 ITGB6P18564 788 aa21.42■■□□□ 1.02
VCPKMT-204ENST00000491402 CLCN7P51798 805 aa21.42■■□□□ 1.02
VCPKMT-204ENST00000491402 TPRG1LQ5T0D9 272 aa21.42■■□□□ 1.02
VCPKMT-204ENST00000491402 SH2D5Q6ZV89 423 aa21.42■■□□□ 1.02
VCPKMT-204ENST00000491402 RAPH1Q70E73 1250 aa21.42■■□□□ 1.02
VCPKMT-204ENST00000491402 TRAPPC5Q8IUR0 188 aa21.42■■□□□ 1.02
VCPKMT-204ENST00000491402 ZNF514Q96K75 400 aaPredicted RBP21.42■■□□□ 1.02
VCPKMT-204ENST00000491402 MIR1-1HGQ9H1L0 117 aa21.42■■□□□ 1.02
VCPKMT-204ENST00000491402 GALPQ9UBC7 116 aa21.42■■□□□ 1.02
VCPKMT-204ENST00000491402 TNRC6BQ9UPQ9 1833 aaKnown RBP21.42■■□□□ 1.02
VCPKMT-204ENST00000491402 HMGB1P1B2RPK0 211 aaPredicted RBP21.41■■□□□ 1.02
VCPKMT-204ENST00000491402 F8W8V4 182 aa21.41■■□□□ 1.02
VCPKMT-204ENST00000491402 CHUKO15111 745 aa21.41■■□□□ 1.02
VCPKMT-204ENST00000491402 DNAJC6O75061 913 aa21.41■■□□□ 1.02
VCPKMT-204ENST00000491402 CEACAM5P06731 702 aa21.41■■□□□ 1.02
VCPKMT-204ENST00000491402 SLC35E2BP0CK96 405 aa21.41■■□□□ 1.02
VCPKMT-204ENST00000491402 PYGBP11216 843 aa21.41■■□□□ 1.02
VCPKMT-204ENST00000491402 HTR1BP28222 390 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms