RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 NBPF19A0A087WUL8 3843 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 TNRC6AQ8NDV7 1962 aaKnown RBP8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 POLEQ07864 2286 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 C3orf70A6NLC5 250 aaPredicted RBP8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 SPAG6O75602 509 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 MTA2O94776 668 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 KIAA0754O94854 1291 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 SLC25A14O95258 325 aaPredicted RBP8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 CCNYL3P0C7X3 344 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 TNNT1P13805 278 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 TYRP1P17643 537 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 AMD1P17707 334 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 CD86P42081 329 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 MAPK9P45984 424 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 LEPRP48357 1165 aaKnown RBP8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 MARCKSL1P49006 195 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 ADCY2Q08462 1091 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 PPIDQ08752 370 aaKnown RBP8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 ZBTB17Q13105 803 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 TBX2Q13207 712 aaPredicted RBP8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 SEMA5AQ13591 1074 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 DNASE1L3Q13609 305 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 ERV3-1Q14264 604 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 SLC18A3Q16572 532 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 ZNF517Q6ZMY9 492 aaPredicted RBP8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 LRRTM4Q86VH4 590 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 PPP1R3BQ86XI6 285 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 KMT5CQ86Y97 462 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 PLD5Q8N7P1 536 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 THAP4Q8WY91 577 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 UBXN4Q92575 508 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 STAMBPL1Q96FJ0 436 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 IMP4Q96G21 291 aaKnown RBP8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 TGM7Q96PF1 710 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 VPS35Q96QK1 796 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 SPATA16Q9BXB7 569 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 TSPY26PQ9H489 355 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 LHX9Q9NQ69 397 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 DTLQ9NZJ0 730 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 LCMT1Q9UIC8 334 aa8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 PCDHGA9Q9Y5G4 932 aaKnown RBP8.3□□□□□ -1.08
APOBEC3F-204ENST00000491387 SPTBP11277 2137 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 BLACEA4D250 179 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 F5H423 210 aaPredicted RBP8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 KCNK1O00180 336 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 KIF1CO43896 1103 aaKnown RBP8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 JCHAINP01591 159 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 PDGFAP04085 211 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 KRT7P08729 469 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 NR1D1P20393 614 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 IDSP22304 550 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 KDELR1P24390 212 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 DEKP35659 375 aaKnown RBP8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 PPM1FP49593 454 aaPredicted RBP8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 SEPHS1P49903 392 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 DMPKQ09013 629 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 GPR18Q14330 331 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 GALNT3Q14435 633 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 NOMO1Q15155 1222 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 UGT8Q16880 541 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 INSCQ1MX18 579 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 CACHD1Q5VU97 1274 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 CAPRIN2Q6IMN6 1127 aaKnown RBP8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 RASGRP3Q8IV61 690 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 TRIM48Q8IWZ4 208 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 CARFQ8N187 725 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 KCTD6Q8NC69 237 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 SLC35G2Q8TBE7 412 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 CT55Q8WUE5 264 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 RSC1A1Q92681 617 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 IQCDQ96DY2 449 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 LRFN5Q96NI6 719 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 RNF157Q96PX1 679 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 TWSG1Q9GZX9 223 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 SLC25A51Q9H1U9 297 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 OSGEPL1Q9H4B0 414 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 NHEJ1Q9H9Q4 299 aaPredicted RBP8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 PDE7BQ9NP56 450 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 ARFGAP3Q9NP61 516 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 UVRAGQ9P2Y5 699 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 SAE1Q9UBE0 346 aaPredicted RBP8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 TMPRSS11EQ9UL52 423 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 PCDHGB7Q9Y5F8 929 aa8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 DNMT3AQ9Y6K1 912 aaPredicted RBP8.29□□□□□ -1.08
APOBEC3F-204ENST00000491387 CACNA1DQ01668 2161 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 A0A0U1RQJ8 604 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 PIPSLA2A3N6 862 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 LRRD1A4D1F6 860 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 CDC14CA4D256 554 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 RCCD1A6NED2 376 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 PDZK1P1A8MUH7 402 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 KATNA1O75449 491 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 CEACAM4O75871 244 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 RASSF9O75901 435 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 SORBS2O94875 1100 aaKnown RBP8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 CDK14O94921 469 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 TIAF1O95411 115 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 H2AFZP0C0S5 128 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 TMEM253P0C7T8 217 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 PIRTP0C851 137 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms