RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 FICDQ9BVA6 458 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 PDP2Q9P2J9 529 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 SSUH2Q9Y2M2 353 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 SPO11Q9Y5K1 396 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 LRP4O75096 1905 aa16.31■□□□□ 0.2
PDLIM2-217ENST00000491330 GRID2IPA4D2P6 1211 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 C9orf172C9J069 976 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 F5H423 210 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 POLR1CO15160 346 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 MTX2O75431 263 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 RASSF9O75901 435 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 ITGB2P05107 769 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 FGF3P11487 239 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 ETV5P41161 510 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 MARCKSL1P49006 195 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 KRT33BQ14525 404 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 ANKRD20A2Q5SQ80 823 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 ANKRD20A1Q5TYW2 823 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 ANKRD20A3Q5VUR7 823 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 TMPRSS9Q7Z410 1059 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 ULK4Q96C45 1275 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 SPATA13Q96N96 652 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 BBC3Q96PG8 261 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 VPS37BQ9H9H4 285 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 FBXO8Q9NRD0 319 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 KLHL3Q9UH77 587 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 TFR2Q9UP52 801 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 DUSP10Q9Y6W6 482 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 ZFYVE26Q68DK2 2539 aa16.3■□□□□ 0.2
PDLIM2-217ENST00000491330 DMXL2Q8TDJ6 3036 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 RP1P56715 2156 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 AURKAO14965 403 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 EFSO43281 561 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 POP7O75817 140 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 AGTP01019 485 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 RPL10P27635 214 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 MAP4P27816 1152 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 CHRNA4P43681 627 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 ARL4DP49703 201 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 MC2RQ01718 297 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 ADCY2Q08462 1091 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 LAMB3Q13751 1172 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 TGIF1Q15583 401 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 CHRNA6Q15825 494 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 P3H1Q32P28 736 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 ZNF648Q5T619 568 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 ARMC6Q6NXE6 501 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 TMEM220Q6QAJ8 160 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 TTC30BQ8N4P2 665 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 DDHD1Q8NEL9 900 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 OXNAD1Q96HP4 312 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 C19orf43Q9BQ61 176 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 ASB8Q9H765 288 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 FOXJ2Q9P0K8 574 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 CRLS1Q9UJA2 301 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 ACSL5Q9ULC5 683 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 ADGRG1Q9Y653 693 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 SLC30A1Q9Y6M5 507 aa16.29■□□□□ 0.2
PDLIM2-217ENST00000491330 ASPMQ8IZT6 3477 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 A6NCN8 305 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 F8W8V4 182 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 MAP3K7O43318 606 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 PRAMEF1O95521 474 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 EML2O95834 649 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 ITGALP20701 1170 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 CSF2RBP32927 897 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 MC1RQ01726 317 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 GSE1Q14687 1217 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 PLCL1Q15111 1095 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 PARP6Q2NL67 630 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 ARHGAP22Q7Z5H3 698 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 DTX1Q86Y01 620 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 CACNA2D3Q8IZS8 1091 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 MED8Q96G25 268 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 TTC1Q99614 292 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 TBL1YQ9BQ87 522 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 FRMD8P1Q9BZ68 369 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 SMOXQ9NWM0 555 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 TRIM10Q9UDY6 481 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 HEMK1Q9Y5R4 338 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 COLEC10Q9Y6Z7 277 aa16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 DSPP15924 2871 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-217ENST00000491330 UGT1A9O60656 530 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 CCDC175P0C221 793 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 ANKRD34CP0C6C1 535 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 UGT1A6P19224 532 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 UGT1A1P22309 533 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 UGT1A4P22310 534 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 UGT1A3P35503 534 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 SLC19A1P41440 591 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 DRG2P55039 364 aaKnown RBP16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 UBE2IP63279 158 aaKnown RBP16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 FOXM1Q08050 763 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 FNBP1LQ5T0N5 605 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 GPRC6AQ5T6X5 926 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 SEL1L2Q5TEA6 688 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 KIAA1614Q5VZ46 1190 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 RANBP10Q6VN20 620 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 LINC00523Q86TU6 105 aa16.27■□□□□ 0.2
PDLIM2-217ENST00000491330 NLGN4XQ8N0W4 816 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms