RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CENPLQ8N0S6 344 aaPredicted RBP22.55■■□□□ 1.2
USF3-203ENST00000491165 GABRG3Q99928 467 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 HEPHQ9BQS7 1158 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 SPATA16Q9BXB7 569 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 CPEB1Q9BZB8 566 aaKnown RBP22.55■■□□□ 1.2
USF3-203ENST00000491165 LTB4R2Q9NPC1 389 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 C2orf42Q9NWW7 574 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 PACSIN3Q9UKS6 424 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 ACOT9Q9Y305 439 aa22.55■■□□□ 1.2
USF3-203ENST00000491165 DMDP11532 3685 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 A0A0U1RQS6 177 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 A0A1W2PQF6 199 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 TXNDC9O14530 226 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 HTRA2O43464 458 aaPredicted RBP22.54■■□□□ 1.2
USF3-203ENST00000491165 AHSGP02765 367 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 RECQLP46063 649 aaPredicted RBP22.54■■□□□ 1.2
USF3-203ENST00000491165 BCL2L1Q07817 233 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 GAS6Q14393 721 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 HERC3Q15034 1050 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 CACUL1Q86Y37 369 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 CDRT15Q96T59 188 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 ATP13A3Q9H7F0 1226 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 IL36AQ9UHA7 158 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 BCAP29Q9UHQ4 241 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 KANSL1LA0AUZ9 987 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 TARM1B6A8C7 271 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 GABRB3P28472 473 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 GSTT1P30711 240 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 POLD2P49005 469 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 PGGT1BP53609 377 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 FOLH1Q04609 750 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 FLOT2Q14254 428 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 UBXN2BQ14CS0 331 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 RBBP5Q15291 538 aaKnown RBP22.54■■□□□ 1.2
USF3-203ENST00000491165 SLC14A2Q15849 920 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 CNPY1Q3B7I2 92 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 PIGGQ5H8A4 983 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 CNTN4Q8IWV2 1026 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 RCN3Q96D15 328 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 FEM1CQ96JP0 617 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 CATSPER2Q96P56 530 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 XPR1Q9UBH6 696 aa22.54■■□□□ 1.2
USF3-203ENST00000491165 PIRTP0C851 137 aa22.53■■□□□ 1.2
USF3-203ENST00000491165 THOP1P52888 689 aa22.53■■□□□ 1.2
USF3-203ENST00000491165 RAB10P61026 200 aa22.53■■□□□ 1.2
USF3-203ENST00000491165 ELAVL3Q14576 367 aaKnown RBP22.53■■□□□ 1.2
USF3-203ENST00000491165 ZNF423Q2M1K9 1284 aa22.53■■□□□ 1.2
USF3-203ENST00000491165 LRRC73Q5JTD7 316 aa22.53■■□□□ 1.2
USF3-203ENST00000491165 NXNQ6DKJ4 435 aa22.53■■□□□ 1.2
USF3-203ENST00000491165 ZFP1Q6P2D0 407 aa22.53■■□□□ 1.2
USF3-203ENST00000491165 PGAM4Q8N0Y7 254 aa22.53■■□□□ 1.2
USF3-203ENST00000491165 LSMEM2Q8N112 164 aa22.53■■□□□ 1.2
USF3-203ENST00000491165 ECHDC3Q96DC8 303 aa22.53■■□□□ 1.2
USF3-203ENST00000491165 KLHL32Q96NJ5 620 aa22.53■■□□□ 1.2
USF3-203ENST00000491165 MKRN2Q9H000 416 aaKnown RBP22.53■■□□□ 1.2
USF3-203ENST00000491165 SUV39H2Q9H5I1 410 aa22.53■■□□□ 1.2
USF3-203ENST00000491165 TECTAO75443 2155 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 DLX3O60479 287 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 SNUPNO95149 360 aaKnown RBP22.52■■□□□ 1.2
USF3-203ENST00000491165 PGLSO95336 258 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 CHN2P52757 468 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 MRPS21P82921 87 aaKnown RBP22.52■■□□□ 1.2
USF3-203ENST00000491165 CAMK2GQ13555 558 aaPredicted RBP22.52■■□□□ 1.2
USF3-203ENST00000491165 FBXO43Q4G163 708 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 TJAP1Q5JTD0 557 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 TMEM92Q6UXU6 159 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 MMAAQ8IVH4 418 aaKnown RBP22.52■■□□□ 1.2
USF3-203ENST00000491165 LPCAT1Q8NF37 534 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 PIH1D2Q8WWB5 315 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 PPP1R2P1Q96PQ5 205 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 SLC6A17Q9H1V8 727 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 LMAN1LQ9HAT1 526 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 ZBTB26Q9HCK0 441 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.52■■□□□ 1.2
USF3-203ENST00000491165 CAPN8A6NHC0 703 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 HOXB2P14652 356 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 SERPINA4P29622 427 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 MAPK8P45983 427 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 MPP1Q00013 466 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 TMEM198Q66K66 360 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 FBXL19Q6PCT2 694 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 GDPD4Q6W3E5 623 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 DCUN1D1Q96GG9 259 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 TBC1D17Q9HA65 648 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 ARNT2Q9HBZ2 717 aa22.52■■□□□ 1.2
USF3-203ENST00000491165 VPS13AQ96RL7 3174 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 FAM95CA0A1B0GW59 222 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 FAM170BA6NMN3 283 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 PLK4O00444 970 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 CLGNO14967 610 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 NPC1O15118 1278 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 SOCS5O75159 536 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 VAPBO95292 243 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 STMN1P16949 149 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 XRCC1P18887 633 aaPredicted RBP22.51■■□□□ 1.19
USF3-203ENST00000491165 ZXDAP98168 799 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 SEMG2Q02383 582 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 POU6F1Q14863 301 aa22.51■■□□□ 1.19
USF3-203ENST00000491165 PDCD2Q16342 344 aaPredicted RBP22.51■■□□□ 1.19
USF3-203ENST00000491165 UGT2A3Q6UWM9 527 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms