RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CAPN15O75808 1086 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 SOAT2O75908 522 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 ENO2P09104 434 aaPredicted RBP19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 SERPINB1P30740 379 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 CPT1AP50416 773 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 FCGRTP55899 365 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 UFM1P61960 85 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 EPS8Q12929 822 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 HIST2H2ACQ16777 129 aaPredicted RBP19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 GNASQ5JWF2 1037 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 UGT3A1Q6NUS8 523 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 RANBP10Q6VN20 620 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 OSTM1Q86WC4 334 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 RALGPS2Q86X27 583 aaPredicted RBP19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 RYBPQ8N488 228 aaPredicted RBP19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 ATPAF2Q8N5M1 289 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 ARL10Q8N8L6 244 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 GABPB2Q8TAK5 448 aaPredicted RBP19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 GLMNQ92990 594 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 CAPNS2Q96L46 248 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 MRGPRX2Q96LB1 330 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 WDCPQ9H6R7 721 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 AIG1Q9NVV5 245 aa19.16■□□□□ 0.66
SNAPC3-206ENST00000490969 RRN3P2A6NIE6 340 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 VPS4BO75351 444 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 AKR1A1P14550 325 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 ALDH4A1P30038 563 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 CCND3P30281 292 aaPredicted RBP19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 MAP3K7CLP57077 242 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 DAOAP59103 153 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 CACNB2Q08289 660 aaPredicted RBP19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 PFKFB4Q16877 469 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 FAM98BQ52LJ0 330 aaKnown RBP19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 ATAD3BQ5T9A4 648 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 SPATA19Q7Z5L4 167 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 LDB1Q86U70 411 aaPredicted RBP19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 CILP2Q8IUL8 1156 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 ARMC8Q8IUR7 673 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 DTWD1Q8N5C7 304 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 OR13J1Q8NGT2 312 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 ITFG1Q8TB96 612 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 NECTIN3Q9NQS3 549 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 GDAP2Q9NXN4 497 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 SUN2Q9UH99 717 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 NOBOXO60393 691 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 MAN1A2O60476 641 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 CHRNA1P02708 482 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 CD1DP15813 335 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 ZNF135P52742 658 aaPredicted RBP19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 IST1P53990 364 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 CHRNB3Q05901 458 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 FAR1Q8WVX9 515 aa19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 PGAP3Q96FM1 320 aaPredicted RBP19.15■□□□□ 0.66
SNAPC3-206ENST00000490969 A0A1B0GTL3 188 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 SLC22A3O75751 556 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 POLR2JP52435 117 aaKnown RBP19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 LSM3P62310 102 aaKnown RBP19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 KCNAB2Q13303 367 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 TMEM236Q5W0B7 351 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 SULT1C3Q6IMI6 304 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 PJA1Q8NG27 643 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 HHIPL1Q96JK4 782 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 OSBPL10Q9BXB5 764 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 ALOXE3Q9BYJ1 711 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 SPC25Q9HBM1 224 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 UBQLN1Q9UMX0 589 aaKnown RBP19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 MKI67P46013 3256 aaKnown RBP19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 MIA3Q5JRA6 1907 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 PSMD11O00231 422 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 HLA-DQB2P05538 268 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 EMX1Q04741 257 aaPredicted RBP19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 CDC20Q12834 499 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 GRIK2Q13002 908 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 NEK10Q6ZWH5 1172 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 CTU1Q7Z7A3 348 aaKnown RBP19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 AKAP14Q86UN6 197 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 ATP6V0D2Q8N8Y2 350 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 PHF10Q8WUB8 498 aaKnown RBP19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 ISG20Q96AZ6 181 aaKnown RBP19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 ZNF560Q96MR9 790 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 MED10Q9BTT4 135 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 NDEL1Q9GZM8 345 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 CPNE5Q9HCH3 593 aa19.14■□□□□ 0.65
SNAPC3-206ENST00000490969 SMIM35A0A1B0GVV1 85 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 DUSP11O75319 330 aaKnown RBP19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 CNTN5O94779 1100 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 NTRK1P04629 796 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 PRR35P0CG20 571 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 CD40LGP29965 261 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 MRPL19P49406 292 aaKnown RBP19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 ISL1P61371 349 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 VBP1P61758 197 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 PPP2R2BQ00005 443 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 IFITM2Q01629 132 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 PCSK7Q16549 785 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 PM20D1Q6GTS8 502 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 BEND5Q7L4P6 421 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 HID1Q8IV36 788 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 HS3ST5Q8IZT8 346 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 DYNC2LI1Q8TCX1 351 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms