RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 VPS18Q9P253 973 aa8.34□□□□□ -1.07
PCOLCE-209ENST00000490909 KLHL3Q9UH77 587 aa8.34□□□□□ -1.07
PCOLCE-209ENST00000490909 PACSIN2Q9UNF0 486 aaPredicted RBP8.34□□□□□ -1.07
PCOLCE-209ENST00000490909 TP53TG5Q9Y2B4 290 aa8.34□□□□□ -1.07
PCOLCE-209ENST00000490909 MAN2B2Q9Y2E5 1009 aa8.34□□□□□ -1.07
PCOLCE-209ENST00000490909 SAR1BQ9Y6B6 198 aa8.34□□□□□ -1.07
PCOLCE-209ENST00000490909 CELSR2Q9HCU4 2923 aa8.34□□□□□ -1.07
PCOLCE-209ENST00000490909 SPTBP11277 2137 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 LILRA5A6NI73 299 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 PRR19A6NJB7 356 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 CLDN7O95471 211 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 PDGFAP04085 211 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 MMP2P08253 660 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 ANKRD34CP0C6C1 535 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 ZNF30P17039 623 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 GARSP41250 739 aaKnown RBP8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 MAPK9P45984 424 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 UQCRFS1P47985 274 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 SH3BP2P78314 561 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 NIPAL4Q0D2K0 466 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 ABHD18Q0P651 414 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 KLF1Q13351 362 aaPredicted RBP8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 BIRC2Q13490 618 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 UBAP2LQ14157 1087 aaKnown RBP8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 DEFB109BQ30KR1 87 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 RALGPS1Q5JS13 557 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 ZNF648Q5T619 568 aaPredicted RBP8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 CCDC181Q5TID7 509 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 MARC1Q5VT66 337 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 HIST2H2BCQ6DN03 193 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 IYDQ6PHW0 289 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 CHST15Q7LFX5 561 aaPredicted RBP8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 SLC13A5Q86YT5 568 aaPredicted RBP8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 LPCAT1Q8NF37 534 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 OR10G6Q8NH81 332 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 EID2BQ96D98 161 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 CATSPER2Q96P56 530 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 OLFM3Q96PB7 478 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 TEFMQ96QE5 360 aaKnown RBP8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 LYSMD1Q96S90 227 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 OSBPL9Q96SU4 736 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 VAT1Q99536 393 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 SLC38A3Q99624 504 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 DPYSL5Q9BPU6 564 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 ARFGAP3Q9NP61 516 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 FEZ2Q9UHY8 353 aaPredicted RBP8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 ANAPC2Q9UJX6 822 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 CHKBQ9Y259 395 aa8.33□□□□□ -1.08
PCOLCE-209ENST00000490909 GOLGA6L10A0A0M3HER8 536 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 PGRMC1O00264 195 aaKnown RBP8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 MATN3O15232 486 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 CEP104O60308 925 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 TIAF1O95411 115 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 C9P02748 559 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 RNF224P0DH78 156 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 GP1BBP13224 206 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 F3P13726 295 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 CES1P23141 567 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 STIP1P31948 543 aaKnown RBP8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 PAFAH1B1P43034 410 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 LEPRP48357 1165 aaKnown RBP8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 EPHA4P54764 986 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 PPP1CAP62136 330 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 PPIDQ08752 370 aaKnown RBP8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 NOMO1Q15155 1222 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 CCNG2Q16589 344 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 PLA2G4EQ3MJ16 856 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 KHDC1Q4VXA5 237 aaKnown RBP8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 LACTB2Q53H82 288 aaPredicted RBP8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 KAZNQ674X7 775 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 DRICH1Q6PGQ1 229 aaPredicted RBP8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 CEACAM20Q6UY09 585 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 CDKL3Q8IVW4 592 aaPredicted RBP8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 TFB1MQ8WVM0 346 aaKnown RBP8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 NCSTNQ92542 709 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 RSC1A1Q92681 617 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 AHCYL2Q96HN2 611 aaKnown RBP8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 PPP1R2P1Q96PQ5 205 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 RUFY1Q96T51 708 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 HERPUD2Q9BSE4 406 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 POLR1EQ9GZS1 481 aaKnown RBP8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 PRDM8Q9NQV8 689 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 FBXO8Q9NRD0 319 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 KCNMB2Q9Y691 235 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 SLC30A1Q9Y6M5 507 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 RPS6KL1Q9Y6S9 549 aa8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 TEP1Q99973 2627 aaKnown RBP8.32□□□□□ -1.08
PCOLCE-209ENST00000490909 PCM1Q15154 2024 aa8.31□□□□□ -1.08
PCOLCE-209ENST00000490909 C1orf232A0A0U1RR37 186 aa8.31□□□□□ -1.08
PCOLCE-209ENST00000490909 CAPN5O15484 640 aaPredicted RBP8.31□□□□□ -1.08
PCOLCE-209ENST00000490909 ZW10O43264 779 aa8.31□□□□□ -1.08
PCOLCE-209ENST00000490909 KIF1CO43896 1103 aaKnown RBP8.31□□□□□ -1.08
PCOLCE-209ENST00000490909 NUAK1O60285 661 aa8.31□□□□□ -1.08
PCOLCE-209ENST00000490909 ZNF500O60304 480 aaPredicted RBP8.31□□□□□ -1.08
PCOLCE-209ENST00000490909 SNX2O60749 519 aa8.31□□□□□ -1.08
PCOLCE-209ENST00000490909 DNAJB5O75953 348 aa8.31□□□□□ -1.08
PCOLCE-209ENST00000490909 STK10O94804 968 aaKnown RBP8.31□□□□□ -1.08
PCOLCE-209ENST00000490909 ASMTLO95671 621 aa8.31□□□□□ -1.08
PCOLCE-209ENST00000490909 FGGP02679 453 aa8.31□□□□□ -1.08
PCOLCE-209ENST00000490909 BRAFP15056 766 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms