RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 XPO4Q9C0E2 1151 aaKnown RBP17.47■□□□□ 0.39
YIPF3-208ENST00000490447 GLOD4Q9HC38 313 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 BPIFA1Q9NP55 256 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 SLC40A1Q9NP59 571 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 SPENQ96T58 3664 aaKnown RBP17.47■□□□□ 0.39
YIPF3-208ENST00000490447 SSU72P8A0A1W2PR75 194 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 C3orf70A6NLC5 250 aaPredicted RBP17.47■□□□□ 0.39
YIPF3-208ENST00000490447 KATNA1O75449 491 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 MT-ND3P03897 115 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 TNNT1P13805 278 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 BRAFP15056 766 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 FOXK1P85037 733 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 TMEM115Q12893 351 aaPredicted RBP17.47■□□□□ 0.39
YIPF3-208ENST00000490447 TRIM14Q14142 442 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 ERV3-1Q14264 604 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 ATP13A5Q4VNC0 1218 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 AGAP9Q5VTM2 703 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 ZDHHC20Q5W0Z9 365 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 WASH2PQ6VEQ5 465 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 ZNF547Q8IVP9 402 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 OR8K1Q8NGG5 319 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 BRSK1Q8TDC3 778 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 RNF25Q96BH1 459 aaPredicted RBP17.47■□□□□ 0.39
YIPF3-208ENST00000490447 TADA1Q96BN2 335 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 PDE7BQ9NP56 450 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 WASH6PQ9NQA3 447 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 DDX56Q9NY93 547 aaKnown RBP17.47■□□□□ 0.39
YIPF3-208ENST00000490447 UBP1Q9NZI7 540 aa17.47■□□□□ 0.39
YIPF3-208ENST00000490447 PRR19A6NJB7 356 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 MKRN2OSH3BPM6 223 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 AURKAO14965 403 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 KIF1CO43896 1103 aaKnown RBP17.46■□□□□ 0.38
YIPF3-208ENST00000490447 TPM1P09493 284 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 F8A1P23610 371 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 HMGCLP35914 325 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 KLRB1Q12918 225 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 ASTE1Q2TB18 679 aaPredicted RBP17.46■□□□□ 0.38
YIPF3-208ENST00000490447 KHDC1Q4VXA5 237 aaKnown RBP17.46■□□□□ 0.38
YIPF3-208ENST00000490447 LRRC38Q5VT99 294 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 KLHL35Q6PF15 583 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 B4GALNT4Q76KP1 1039 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 RHOT1Q8IXI2 618 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 TEKT5Q96M29 485 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 DNAJC7Q99615 494 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 TRABDQ9H4I3 376 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 FAM153AQ9UHL3 310 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 POLHQ9Y253 713 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 SPO11Q9Y5K1 396 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 KCNMB2Q9Y691 235 aa17.46■□□□□ 0.38
YIPF3-208ENST00000490447 KCNJ13O60928 360 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 SPAG6O75602 509 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 FGF5P12034 268 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 PTPN3P26045 913 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 SPAM1P38567 509 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 SLC1A1P43005 524 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 NR2C2P49116 596 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 IGFBP7Q16270 282 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 PPP2R5EQ16537 467 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.45■□□□□ 0.38
YIPF3-208ENST00000490447 AMZ2Q86W34 360 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 TFB1MQ8WVM0 346 aaKnown RBP17.45■□□□□ 0.38
YIPF3-208ENST00000490447 KLHL6Q8WZ60 621 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 CCDC42Q96M95 316 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 RAB33BQ9H082 229 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.45■□□□□ 0.384e-8■■□□□ 14.5
YIPF3-208ENST00000490447 EPHA6Q9UF33 1036 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 PADI1Q9ULC6 663 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 TP53TG5Q9Y2B4 290 aa17.45■□□□□ 0.38
YIPF3-208ENST00000490447 CDC14CA4D256 554 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 CBFA2T2O43439 604 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 SPOPO43791 374 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 NELFEP18615 380 aaKnown RBP17.44■□□□□ 0.38
YIPF3-208ENST00000490447 ARL4DP49703 201 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 TUBB3Q13509 450 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 UBAP2LQ14157 1087 aaKnown RBP17.44■□□□□ 0.38
YIPF3-208ENST00000490447 TFDP2Q14188 446 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 PLCL1Q15111 1095 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 LDLRAP1Q5SW96 308 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 GLT6D1Q7Z4J2 308 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 C11orf96Q7Z7L8 435 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 TEX19Q8NA77 164 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 SIDT2Q8NBJ9 832 aaKnown RBP17.44■□□□□ 0.38
YIPF3-208ENST00000490447 UBXN4Q92575 508 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 TWSG1Q9GZX9 223 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 HACD3Q9P035 362 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 KLHL8Q9P2G9 620 aaPredicted RBP17.44■□□□□ 0.38
YIPF3-208ENST00000490447 RARRES3Q9UL19 164 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 WDR37Q9Y2I8 494 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 PKP3Q9Y446 797 aa17.44■□□□□ 0.38
YIPF3-208ENST00000490447 PTPN13Q12923 2485 aa17.43■□□□□ 0.38
YIPF3-208ENST00000490447 FLNCQ14315 2725 aa17.43■□□□□ 0.38
YIPF3-208ENST00000490447 PIPSLA2A3N6 862 aa17.43■□□□□ 0.38
YIPF3-208ENST00000490447 GOLGA6L3A6NEY3 463 aa17.43■□□□□ 0.38
YIPF3-208ENST00000490447 MTSS1O43312 755 aa17.43■□□□□ 0.38
YIPF3-208ENST00000490447 RFPL1O75677 317 aa17.43■□□□□ 0.38
YIPF3-208ENST00000490447 NFKB1P19838 968 aa17.43■□□□□ 0.38
YIPF3-208ENST00000490447 PTMSP20962 102 aa17.43■□□□□ 0.38
YIPF3-208ENST00000490447 FECHP22830 423 aa17.43■□□□□ 0.38
YIPF3-208ENST00000490447 ITGA9Q13797 1035 aa17.43■□□□□ 0.38
YIPF3-208ENST00000490447 PRKD1Q15139 912 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms