RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 OR2W1Q9Y3N9 320 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 PCDHGA5Q9Y5G8 931 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 PCDHAC2Q9Y5I4 1007 aa3.82□□□□□ -1.8
CD46-216ENST00000490278 TRIP12Q14669 1992 aaPredicted RBP3.82□□□□□ -1.8
CD46-216ENST00000490278 TAF1P21675 1872 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 SYNDIG1LA6NDD5 238 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 TMEM189-UBE2V1I3L0A0 370 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 SLC16A5O15375 505 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 NDUFS4O43181 175 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 ZNHIT1O43257 154 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 ADAM20O43506 726 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 LDB3O75112 727 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 FAM106CPP0CH98 169 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 ITGA2P17301 1181 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 NMBRP28336 390 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 TKTP29401 623 aaKnown RBP3.81□□□□□ -1.8
CD46-216ENST00000490278 AMPHP49418 695 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 ARSEP51690 589 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 PLIN5Q00G26 463 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 GAGE2BQ13066 116 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 ZBTB17Q13105 803 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 UBE2V1Q13404 147 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 GRAPQ13588 217 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 GTF2H2Q13888 395 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 BAATQ14032 418 aaPredicted RBP3.81□□□□□ -1.8
CD46-216ENST00000490278 GAGE2EQ4V326 116 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 RAB6CQ53S08 254 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 BMP2KLQ5H9B9 411 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 IRAK1BP1Q5VVH5 260 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 GARNL3Q5VVW2 1013 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 GAGE2AQ6NT46 116 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 GTF2H2CQ6P1K8 395 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 ASB18Q6ZVZ8 466 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 INTS8Q75QN2 995 aaKnown RBP3.81□□□□□ -1.8
CD46-216ENST00000490278 GALNT13Q8IUC8 556 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 OR8H2Q8N162 312 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 NME8Q8N427 588 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 MINDY1Q8N5J2 469 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 BBS10Q8TAM1 723 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 LMO3Q8TAP4 145 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 LNX1Q8TBB1 728 aaPredicted RBP3.81□□□□□ -1.8
CD46-216ENST00000490278 PTPMT1Q8WUK0 201 aaPredicted RBP3.81□□□□□ -1.8
CD46-216ENST00000490278 TMEM255BQ8WV15 326 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 SNRNP27Q8WVK2 155 aaKnown RBP3.81□□□□□ -1.8
CD46-216ENST00000490278 IL17FQ96PD4 163 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 NEURL2Q9BR09 285 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 SPATC1LQ9H0A9 340 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 RAB6CQ9H0N0 254 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 CSTL1Q9H114 145 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 LRMDAQ9H2I8 198 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 KCNK15Q9H427 330 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 CHMP1AQ9HD42 196 aaPredicted RBP3.81□□□□□ -1.8
CD46-216ENST00000490278 TAS2R14Q9NYV8 317 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 RCC2Q9P258 522 aaKnown RBP3.81□□□□□ -1.8
CD46-216ENST00000490278 MARCH4Q9P2E8 410 aaPredicted RBP3.81□□□□□ -1.8
CD46-216ENST00000490278 CPSF2Q9P2I0 782 aaKnown RBP3.81□□□□□ -1.8
CD46-216ENST00000490278 GAGE2DQ9UEU5 116 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 HACL1Q9UJ83 578 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 POU2F3Q9UKI9 436 aa3.81□□□□□ -1.8
CD46-216ENST00000490278 MAGED1Q9Y5V3 778 aaPredicted RBP3.81□□□□□ -1.8
CD46-216ENST00000490278 LOC102723996A0A087X1L8 192 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 ZCWPW2A0A1B0GU75 182 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 DENND3A2RUS2 1198 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 OR5K3A6NET4 321 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 A6NL46 340 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 TULP2O00295 520 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 BUD23O43709 281 aaKnown RBP3.8□□□□□ -1.8
CD46-216ENST00000490278 WDR1O75083 606 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 CSPG5O95196 566 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 TPOP07202 933 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 SNRNP70P08621 437 aaKnown RBP3.8□□□□□ -1.8
CD46-216ENST00000490278 TGFB3P10600 412 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 CDH1P12830 882 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 IL11P20809 199 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 IL15P40933 162 aaPredicted RBP3.8□□□□□ -1.8
CD46-216ENST00000490278 CD81P60033 236 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 EEF1A2Q05639 463 aaKnown RBP3.8□□□□□ -1.8
CD46-216ENST00000490278 CALD1Q05682 793 aaKnown RBP3.8□□□□□ -1.8
CD46-216ENST00000490278 RUNX1T1Q06455 604 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 COASYQ13057 564 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 FAM98BQ52LJ0 330 aaKnown RBP3.8□□□□□ -1.8
CD46-216ENST00000490278 DHRS7BQ6IAN0 325 aaPredicted RBP3.8□□□□□ -1.8
CD46-216ENST00000490278 OR7E24Q6IFN5 339 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 CAPRIN2Q6IMN6 1127 aaKnown RBP3.8□□□□□ -1.8
CD46-216ENST00000490278 KIAA1161Q6NSJ0 714 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 SPSB3Q6PJ21 355 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 TMCO3Q6UWJ1 677 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 PLEKHM3Q6ZWE6 761 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 TUBA1AQ71U36 451 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 Q75L30 129 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 HAUS6Q7Z4H7 955 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 MUC20Q8N307 709 aaPredicted RBP3.8□□□□□ -1.8
CD46-216ENST00000490278 C1orf52Q8N6N3 182 aaKnown RBP3.8□□□□□ -1.8
CD46-216ENST00000490278 LSMEM1Q8N8F7 131 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 SYT2Q8N9I0 419 aaPredicted RBP3.8□□□□□ -1.8
CD46-216ENST00000490278 AVL9Q8NBF6 648 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 TBC1D16Q8TBP0 767 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 SORCS1Q8WY21 1168 aa3.8□□□□□ -1.8
CD46-216ENST00000490278 ZNF622Q969S3 477 aaKnown RBP eCLIP3.8□□□□□ -1.82e-9■□□□□ 9.2
CD46-216ENST00000490278 PHF21AQ96BD5 680 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms