RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 TPGS1Q6ZTW0 290 aa8.77□□□□□ -1
LSAMP-205ENST00000490035 USP43Q70EL4 1123 aa8.77□□□□□ -1
LSAMP-205ENST00000490035 FAM98AQ8NCA5 519 aaKnown RBP8.77□□□□□ -1
LSAMP-205ENST00000490035 CLIC5Q9NZA1 410 aa8.77□□□□□ -1
LSAMP-205ENST00000490035 PTTG2Q9NZH5 202 aa8.77□□□□□ -1
LSAMP-205ENST00000490035 NAV1Q8NEY1 1877 aa8.77□□□□□ -1
LSAMP-205ENST00000490035 PXDNQ92626 1479 aa8.77□□□□□ -1
LSAMP-205ENST00000490035 ORC5O43913 435 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 PLIN3O60664 434 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 LINC00032P0C843 101 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 RPL7AP62424 266 aaKnown RBP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 CPSF6Q16630 551 aaKnown RBP eCLIP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 C9orf64Q5T6V5 341 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 FAM131AQ6UXB0 335 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 TWIST2Q8WVJ9 160 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 ERMAPQ96PL5 475 aaPredicted RBP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 XRN1Q8IZH2 1706 aaKnown RBP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 SLC22A1O15245 554 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 ZSCAN5DPP0CG00 497 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 MTMR14Q8NCE2 650 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 OR52K2Q8NGK3 314 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 GRIN3AQ8TCU5 1115 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 METTL21AQ8WXB1 218 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 C12orf66Q96MD2 445 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 USP20Q9Y2K6 914 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 OR14I1A6ND48 311 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 MATN2O00339 956 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 GABRDO14764 452 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 PLOD3O60568 738 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 ZBTB48P10074 688 aaPredicted RBP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 SMAD3P84022 425 aaKnown RBP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 NOL9Q5SY16 702 aaKnown RBP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 RNASEH2BQ5TBB1 312 aaKnown RBP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 OLFML2AQ68BL7 652 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 CNSTQ6PJW8 725 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 NPNTQ6UXI9 565 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 RGL4Q8IZJ4 473 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 ZNF527Q8NB42 609 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 PHF12Q96QT6 1004 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 CORO1BQ9BR76 489 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 DENND2DQ9H6A0 471 aaPredicted RBP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 TOR4AQ9NXH8 423 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 IGSF9Q9P2J2 1179 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 RBM7Q9Y580 266 aaKnown RBP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 PCDHGB6Q9Y5F9 930 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 TSPAN9O75954 239 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 ARF4P18085 180 aaPredicted RBP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 KHKP50053 298 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 MVKQ03426 396 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 SLC1A5Q15758 541 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 SLCO6A1Q86UG4 719 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 SLC34A3Q8N130 599 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 TUBGCP5Q96RT8 1024 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 NTPCRQ9BSD7 190 aaKnown RBP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 EXO5Q9H790 373 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 ITM2CQ9NQX7 267 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 OGDHLQ9ULD0 1010 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 MRPS17Q9Y2R5 130 aaKnown RBP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 ANGPTL1O95841 491 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 CD247P20963 164 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 RHBDL3P58872 404 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 GRB14Q14449 540 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 SF1Q15637 639 aaKnown RBP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 XYLT1Q86Y38 959 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 CCDC107Q8WV48 283 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 C8orf48Q96LL4 319 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 CST11Q9H112 138 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 TCAF1Q9Y4C2 921 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 E9PAM4 449 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 TNFRSF11BO00300 401 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 SOX30O94993 753 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 METTL18O95568 372 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 C1RP00736 705 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 DBTP11182 482 aaKnown RBP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 RPIAP49247 311 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 MTTPP55157 894 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 BNIP1Q12981 228 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 SNX20Q7Z614 316 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.77□□□□□ -1.01
LSAMP-205ENST00000490035 EURLQ9NYK6 297 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 HCN3Q9P1Z3 774 aa8.77□□□□□ -1.01
LSAMP-205ENST00000490035 CLDN25C9JDP6 229 aa8.76□□□□□ -1.01
LSAMP-205ENST00000490035 CTNNB1P35222 781 aa8.76□□□□□ -1.01
LSAMP-205ENST00000490035 ARCN1P48444 511 aaKnown RBP8.76□□□□□ -1.01
LSAMP-205ENST00000490035 SOX10P56693 466 aa8.76□□□□□ -1.01
LSAMP-205ENST00000490035 GTF2H2Q13888 395 aa8.76□□□□□ -1.01
LSAMP-205ENST00000490035 IL18Q14116 193 aa8.76□□□□□ -1.01
LSAMP-205ENST00000490035 GTF2H2CQ6P1K8 395 aa8.76□□□□□ -1.01
LSAMP-205ENST00000490035 NODALQ96S42 347 aa8.76□□□□□ -1.01
LSAMP-205ENST00000490035 NDNQ99608 321 aa8.76□□□□□ -1.01
LSAMP-205ENST00000490035 TAS2R14Q9NYV8 317 aa8.76□□□□□ -1.01
LSAMP-205ENST00000490035 AASSQ9UDR5 926 aa8.76□□□□□ -1.01
LSAMP-205ENST00000490035 ZNF221Q9UK13 617 aa8.76□□□□□ -1.01
LSAMP-205ENST00000490035 POLR3HQ9Y535 204 aaPredicted RBP8.76□□□□□ -1.01
LSAMP-205ENST00000490035 INSIG1O15503 277 aa8.76□□□□□ -1.01
LSAMP-205ENST00000490035 AKAP8O43823 692 aaKnown RBP8.76□□□□□ -1.01
LSAMP-205ENST00000490035 RPS9P46781 194 aaKnown RBP8.76□□□□□ -1.01
LSAMP-205ENST00000490035 TUBA1BP68363 451 aa8.76□□□□□ -1.01
LSAMP-205ENST00000490035 SNAPC1Q16533 368 aa8.76□□□□□ -1.01
LSAMP-205ENST00000490035 TBC1D25Q3MII6 688 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms