RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 ZNF534Q76KX8 674 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 TRMT1LQ7Z2T5 733 aaKnown RBP4.91□□□□□ -1.62
CCDC39-206ENST00000489868 KLHDC8BQ8IXV7 354 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 HACE1Q8IYU2 909 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 GBGT1Q8N5D6 347 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 METTL27Q8N6F8 245 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-206ENST00000489868 GSDMBQ8TAX9 411 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 ST6GAL2Q96JF0 529 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 SLX1AQ9BQ83 275 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 TRPC7Q9HCX4 862 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 EIF2B3Q9NR50 452 aaKnown RBP4.91□□□□□ -1.62
CCDC39-206ENST00000489868 TRMT1Q9NXH9 659 aaKnown RBP4.91□□□□□ -1.62
CCDC39-206ENST00000489868 CMAHPQ9Y471 501 aa4.91□□□□□ -1.62
CCDC39-206ENST00000489868 IGLV5-45A0A087WSX0 123 aa4.9□□□□□ -1.63
CCDC39-206ENST00000489868 OR2M5A3KFT3 312 aa4.9□□□□□ -1.63
CCDC39-206ENST00000489868 GCNT3O95395 438 aa4.9□□□□□ -1.63
CCDC39-206ENST00000489868 PON1P27169 355 aa4.9□□□□□ -1.63
CCDC39-206ENST00000489868 GLIPR1P48060 266 aa4.9□□□□□ -1.63
CCDC39-206ENST00000489868 HOXA1P49639 335 aaPredicted RBP4.9□□□□□ -1.63
CCDC39-206ENST00000489868 MBTD1Q05BQ5 628 aa4.9□□□□□ -1.63
CCDC39-206ENST00000489868 GAGE5Q13069 117 aa4.9□□□□□ -1.63
CCDC39-206ENST00000489868 GAGE6Q13070 117 aa4.9□□□□□ -1.63
CCDC39-206ENST00000489868 PLA2G4FQ68DD2 849 aa4.9□□□□□ -1.63
CCDC39-206ENST00000489868 TICAM1Q8IUC6 712 aa4.9□□□□□ -1.63
CCDC39-206ENST00000489868 GALNT13Q8IUC8 556 aa4.9□□□□□ -1.63
CCDC39-206ENST00000489868 VPS33BQ9H267 617 aa4.9□□□□□ -1.63
CCDC39-206ENST00000489868 BLOC1S4Q9NUP1 217 aa4.9□□□□□ -1.63
CCDC39-206ENST00000489868 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.9□□□□□ -1.63
CCDC39-206ENST00000489868 RCC2Q9P258 522 aaKnown RBP4.9□□□□□ -1.63
CCDC39-206ENST00000489868 NENFQ9UMX5 172 aa4.9□□□□□ -1.63
CCDC39-206ENST00000489868 A0A0G2JNG1 304 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 AGAP14A8MT82 685 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 PLK4O00444 970 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 SYNCRIPO60506 623 aaKnown RBP4.89□□□□□ -1.63
CCDC39-206ENST00000489868 AMBPP02760 352 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 RB1P06400 928 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 ACTN1P12814 892 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 CSF2RAP15509 400 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 MCCP23508 829 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 HOXA13P31271 388 aaPredicted RBP4.89□□□□□ -1.63
CCDC39-206ENST00000489868 SUOXP51687 545 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 CTSCP53634 463 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 PPP2R2BQ00005 443 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 ACVR2BQ13705 512 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 RBM39Q14498 530 aaKnown RBP4.89□□□□□ -1.63
CCDC39-206ENST00000489868 CRYMQ14894 314 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 KIR2DS5Q14953 304 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 DLG2Q15700 870 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 PLEKHM3Q6ZWE6 761 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 SCYL3Q8IZE3 742 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 C1orf52Q8N6N3 182 aaKnown RBP4.89□□□□□ -1.63
CCDC39-206ENST00000489868 ZNF501Q96CX3 271 aaPredicted RBP4.89□□□□□ -1.63
CCDC39-206ENST00000489868 PGAM5Q96HS1 289 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 C17orf77Q96MU5 243 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 SEMA6AQ9H2E6 1030 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 ZHX3Q9H4I2 956 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 TFB2MQ9H5Q4 396 aaKnown RBP4.89□□□□□ -1.63
CCDC39-206ENST00000489868 DBNLQ9UJU6 430 aaKnown RBP4.89□□□□□ -1.63
CCDC39-206ENST00000489868 ITIH6Q6UXX5 1313 aa4.89□□□□□ -1.63
CCDC39-206ENST00000489868 CDRT15L2A8MXV6 281 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 ANKRD66B4E2M5 251 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 PTGES3LE9PB15 166 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 ZBTB43O43298 467 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 PRKNO60260 465 aaPredicted RBP4.88□□□□□ -1.63
CCDC39-206ENST00000489868 WDHD1O75717 1129 aaPredicted RBP4.88□□□□□ -1.63
CCDC39-206ENST00000489868 PAK4O96013 591 aaPredicted RBP4.88□□□□□ -1.63
CCDC39-206ENST00000489868 TUBBP07437 444 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 KRT19P08727 400 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 PAX1P15863 534 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 ANOS1P23352 680 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 MMP15P51511 669 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 ARF3P61204 181 aaPredicted RBP4.88□□□□□ -1.63
CCDC39-206ENST00000489868 ARF1P84077 181 aaKnown RBP4.88□□□□□ -1.63
CCDC39-206ENST00000489868 TPRG1Q6ZUI0 275 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 ADGRF2Q8IZF7 708 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 ZNF524Q96C55 264 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 SCRN2Q96FV2 425 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 NUDCD1Q96RS6 583 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 BARD1Q99728 777 aaKnown RBP4.88□□□□□ -1.63
CCDC39-206ENST00000489868 NCAPGQ9BPX3 1015 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 HGH1Q9BTY7 390 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 RAD21L1Q9H4I0 556 aa4.88□□□□□ -1.63
CCDC39-206ENST00000489868 TEX13DA0A0J9YY54 714 aaPredicted RBP4.87□□□□□ -1.63
CCDC39-206ENST00000489868 VILLO15195 856 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 SOCS5O75159 536 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 GPC4O75487 556 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 BMP10O95393 424 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 TFAP2AP05549 437 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 LIPFP07098 398 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 ZNF23P17027 643 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 NR2F2P24468 414 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 TERF1P54274 439 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 MEP1AQ16819 746 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 WDR38Q5JTN6 314 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 DGLUCYQ7Z3D6 616 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 TEX11Q8IYF3 940 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 ABHD8Q96I13 439 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 ZNF354BQ96LW1 612 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 SLC22A12Q96S37 553 aa4.87□□□□□ -1.63
CCDC39-206ENST00000489868 DDOQ99489 341 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms