RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 SNHG28P0DPA3 235 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CYP2A6P11509 494 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 TPSB2P20231 275 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 HLA-DMAP28067 261 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CD68P34810 354 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 HNF4AP41235 474 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 MAGEA12P43365 314 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 BAG6P46379 1132 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 NPY2RP49146 381 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 SLC7A2P52569 658 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 NCS1P62166 190 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 LSM3P62310 102 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 TFAMQ00059 246 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 MGAT3Q09327 533 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF252P-AS1Q0IIN9 211 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 SQSTM1Q13501 440 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 SEMA5AQ13591 1074 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 KCNC3Q14003 757 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 DAG1Q14118 895 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 FASTKQ14296 549 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 TPSAB1Q15661 275 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 MEP1AQ16819 746 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 AAK1Q2M2I8 961 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ZIK1Q3SY52 487 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 BCL7AQ4VC05 210 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 AGKQ53H12 422 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ARL13AQ5H913 290 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 PPM1JQ5JR12 505 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 HABP4Q5JVS0 413 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 DNAJC24Q6P3W2 148 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 TMEM65Q6PI78 240 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 BRAT1Q6PJG6 821 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 TBPL2Q6SJ96 375 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 FIP1L1Q6UN15 594 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ZYG11AQ6WRX3 759 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CDH24Q86UP0 819 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 TMEM151BQ8IW70 566 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 PM20D2Q8IYS1 436 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 SLC22A15Q8IZD6 547 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ADGRF4Q8IZF3 695 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 NLGN4XQ8N0W4 816 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 AMER2Q8N7J2 671 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF555Q8NEP9 628 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 FLCNQ8NFG4 579 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 OR13H1Q8NG92 308 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 VANGL1Q8TAA9 524 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 FAM110BQ8TC76 370 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 FANK1Q8TC84 345 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CRYGNQ8WXF5 182 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 RPL3LQ92901 407 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF566Q969W8 418 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 PDXPQ96GD0 296 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 C1orf74Q96LT6 269 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 MFSD14AQ96MC6 490 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 TSNARE1Q96NA8 513 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 GAD1Q99259 594 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 GAS2L1Q99501 681 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CBWD1Q9BRT8 395 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF577Q9BSK1 485 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 FEM1AQ9BSK4 669 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 GSX2Q9BZM3 304 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 UCK2Q9BZX2 261 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 MIR1-1HGQ9H1L0 117 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 DCSTAMPQ9H295 470 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ITM2CQ9NQX7 267 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 DZANK1Q9NVP4 752 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 FAM118AQ9NWS6 357 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ABCD2Q9UBJ2 740 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 GTF2IRD1Q9UHL9 959 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ZDHHC2Q9UIJ5 367 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 VAV3Q9UKW4 847 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 STAP1Q9ULZ2 295 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 USP22Q9UPT9 525 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ANKRD6Q9Y2G4 727 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 KLF2Q9Y5W3 355 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 RGPD5Q99666 1765 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNFX1Q9P2E3 1918 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ATP6AP2A0A1C7CYW4 349 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 PRR23AA6NEV1 266 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 OR6C70A6NIJ9 312 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF98A6NK75 572 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 BBIP1A8MTZ0 92 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ERVV-1B6SEH8 477 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 PTGES3LE9PB15 166 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 SDHDO14521 159 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 AP3D1O14617 1153 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 UBDO15205 165 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 MSH4O15457 936 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 TPST1O60507 370 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 PPP1R11O60927 126 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF623O75123 536 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 TRIM3O75382 744 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CABYRO75952 493 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 OR2B3O76000 313 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 SLC22A5O76082 557 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 OLFM2O95897 454 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ASS1P00966 412 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 FOSP01100 380 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 IFNA14P01570 189 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms