RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 TMEM135Q86UB9 458 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 SLCO6A1Q86UG4 719 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 AMZ2Q86W34 360 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 TMPRSS12Q86WS5 348 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 LMNTD2Q8IXW0 634 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 PIANPQ8IYJ0 282 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 SFRP1Q8N474 314 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 OR2L2Q8NH16 312 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 IFI44Q8TCB0 444 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 ZNF778Q96MU6 729 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 TCF12Q99081 682 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 ERP44Q9BS26 406 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 RAB17Q9H0T7 212 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 STN1Q9H668 368 aaKnown RBP10.91□□□□□ -0.66
CPSF7-212ENST00000489728 SUDS3Q9H7L9 328 aaPredicted RBP10.91□□□□□ -0.66
CPSF7-212ENST00000489728 CAAP1Q9H8G2 361 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 ARFGAP3Q9NP61 516 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 SPATS2LQ9NUQ6 558 aaKnown RBP10.91□□□□□ -0.66
CPSF7-212ENST00000489728 SLC2A6Q9UGQ3 507 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 ANAPC5Q9UJX4 755 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 PCYT1BQ9Y5K3 369 aaPredicted RBP10.91□□□□□ -0.66
CPSF7-212ENST00000489728 MRFAP1Q9Y605 127 aa10.91□□□□□ -0.66
CPSF7-212ENST00000489728 MGAT4DA6NG13 374 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 B4DGG1 531 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 CCL22O00626 93 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 AVILO75366 819 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 TCEA3O75764 348 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 USP1O94782 785 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 TTC4O95801 387 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 FTH1P02794 183 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 POLBP06746 335 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 IDSP22304 550 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 CTSCP53634 463 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 CRADDP78560 199 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 DBN1Q16643 649 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 FNBP1LQ5T0N5 605 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 ZNF648Q5T619 568 aaPredicted RBP10.9□□□□□ -0.66
CPSF7-212ENST00000489728 MRNIPQ6NTE8 343 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 CASC4Q6P4E1 433 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 GUSBP11Q6P575 273 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 TMEM220Q6QAJ8 160 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 ABRAXAS1Q6UWZ7 409 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 TAS2R42Q7RTR8 314 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 EFL1Q7Z2Z2 1120 aaKnown RBP10.9□□□□□ -0.66
CPSF7-212ENST00000489728 LRRC6Q86X45 466 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 RBM12BQ8IXT5 1001 aaKnown RBP10.9□□□□□ -0.66
CPSF7-212ENST00000489728 NAGSQ8N159 534 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 PDIK1LQ8N165 341 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 BEND7Q8N7W2 519 aaPredicted RBP10.9□□□□□ -0.66
CPSF7-212ENST00000489728 GPR150Q8NGU9 434 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 OR6P1Q8NGX9 317 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 GABPB2Q8TAK5 448 aaPredicted RBP10.9□□□□□ -0.66
CPSF7-212ENST00000489728 HM13Q8TCT9 377 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 MAPK15Q8TD08 544 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 SH3KBP1Q96B97 665 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 GRAMD1AQ96CP6 724 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 SIGLEC10Q96LC7 697 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 TRIM51Q9BSJ1 452 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 TSSK1BQ9BXA7 367 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 PHACTR1Q9C0D0 580 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 UCK1Q9HA47 277 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 SARS2Q9NP81 518 aaKnown RBP10.9□□□□□ -0.66
CPSF7-212ENST00000489728 KLC4Q9NSK0 619 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 CATSPERZQ9NTU4 200 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 WHRNQ9P202 907 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 GULP1Q9UBP9 304 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 TBC1D29Q9UFV1 150 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 ACSL5Q9ULC5 683 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 WASF3Q9UPY6 502 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 KCNK6Q9Y257 313 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 VPS9D1Q9Y2B5 631 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 UTP11Q9Y3A2 253 aaKnown RBP10.9□□□□□ -0.66
CPSF7-212ENST00000489728 PRKAB1Q9Y478 270 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 NEUROG3Q9Y4Z2 214 aa10.9□□□□□ -0.66
CPSF7-212ENST00000489728 CCDC78A2IDD5 438 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 CPED1A4D0V7 1026 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 OR2AG2A6NM03 316 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 GOLGA8MH3BSY2 632 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 CD3EAPO15446 510 aaKnown RBP10.89□□□□□ -0.67
CPSF7-212ENST00000489728 RAD51CO43502 376 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 SGTAO43765 313 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 OPA1O60313 960 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 POP7O75817 140 aaKnown RBP10.89□□□□□ -0.67
CPSF7-212ENST00000489728 PGAM1P18669 254 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 OGNP20774 298 aaKnown RBP10.89□□□□□ -0.67
CPSF7-212ENST00000489728 ARNTP27540 789 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 NMBRP28336 390 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 CA5AP35218 305 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 HALP42357 657 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 ARCN1P48444 511 aaKnown RBP10.89□□□□□ -0.67
CPSF7-212ENST00000489728 DRG2P55039 364 aaKnown RBP10.89□□□□□ -0.67
CPSF7-212ENST00000489728 ADARP55265 1226 aaKnown RBP10.89□□□□□ -0.67
CPSF7-212ENST00000489728 ARL4CP56559 192 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 PLOD1Q02809 727 aaPredicted RBP10.89□□□□□ -0.67
CPSF7-212ENST00000489728 CAV1Q03135 178 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 C2orf54Q08AI8 447 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 CALCOCO2Q13137 446 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 RPA4Q13156 261 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 TCEA2Q15560 299 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 HIF1AQ16665 826 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms