RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 HSPH1Q92598 858 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 HAUS1Q96CS2 278 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 KLHL29Q96CT2 875 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 ATXN7L3BQ96GX2 97 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 FEM1CQ96JP0 617 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 DESI2Q9BSY9 194 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 TUBB6Q9BUF5 446 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 CINPQ9BW66 212 aaPredicted RBP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 SLC39A8Q9C0K1 460 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 LRRC19Q9H756 370 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 SP110Q9HB58 689 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 FGF22Q9HCT0 170 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 NEUROD4Q9HD90 331 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 ABHD10Q9NUJ1 306 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 ZDHHC3Q9NYG2 299 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 CNOT8Q9UFF9 292 aaKnown RBP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 REXO2Q9Y3B8 237 aaKnown RBP5.8□□□□□ -1.48
CNOT9-207ENST00000489687 HYOU1Q9Y4L1 999 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 SPO11Q9Y5K1 396 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 FLNCQ14315 2725 aa5.8□□□□□ -1.48
CNOT9-207ENST00000489687 LRRK2Q5S007 2527 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 A0A087WV48 116 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 A0A1W2PQJ5 194 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 ZSCAN5CA6NGD5 496 aaPredicted RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 B4DGG1 531 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 H3BM21 787 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 GOLGA8TH3BQL2 631 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 MEN1O00255 615 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 PDE2AO00408 941 aaPredicted RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 SLC22A1O15245 554 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 NVLO15381 856 aaKnown RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 CAPN5O15484 640 aaPredicted RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 FGF10O15520 208 aaPredicted RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 DAPK3O43293 454 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 PRPSAP2O60256 369 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 PALMO75781 387 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 TM7SF2O76062 418 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 SUN1O94901 812 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 FTLP02792 175 aaPredicted RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 GYPCP04921 128 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 ATP1A1P05023 1023 aaKnown RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 C1SP09871 688 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 TSHRP16473 764 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 ERCC2P18074 760 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 EIF4A3P38919 411 aaKnown RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 PAFAH1B1P43034 410 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 RNF144AP50876 292 aaPredicted RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 ADARP55265 1226 aaKnown RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 MAXP61244 160 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 KLHL30Q0D2K2 578 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 RALGDSQ12967 914 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 DPYSQ14117 519 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 INPP5AQ14642 412 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 NR0B2Q15466 257 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 PPP2R5EQ16537 467 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 HSP90AA5PQ58FG0 334 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 FAXCQ5TGI0 409 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 CDCP2Q5VXM1 449 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 DENND2CQ68D51 928 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 PLEKHA7Q6IQ23 1121 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 ZCCHC8Q6NZY4 707 aaKnown RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 MACC1Q6ZN28 852 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 MARK2Q7KZI7 788 aaKnown RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 NLRP9Q7RTR0 991 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 B3GNT8Q7Z7M8 397 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 TBC1D1Q86TI0 1168 aaPredicted RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 SCUBE1Q8IWY4 988 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 SPACA3Q8IXA5 215 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 DENND6BQ8NEG7 585 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 FNIP1Q8TF40 1166 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 PDCD6IPQ8WUM4 868 aaKnown RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 CPLX3Q8WVH0 158 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 RFFLQ8WZ73 363 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 OR1E3Q8WZA6 343 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 RAB7BQ96AH8 199 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 CCDC74AQ96AQ1 378 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 ARHGEF26Q96DR7 871 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 FCRL3Q96P31 734 aaPredicted RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 LGMNQ99538 433 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 IL12RB2Q99665 862 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 FOXP3Q9BZS1 431 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 STMN4Q9H169 189 aaPredicted RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 ABCG4Q9H172 646 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 CATSPERBQ9H7T0 1116 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 CPNE5Q9HCH3 593 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 PALMDQ9NP74 551 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 MRPL40Q9NQ50 206 aaKnown RBP5.79□□□□□ -1.48
CNOT9-207ENST00000489687 INIPQ9NRY2 104 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 PARVAQ9NVD7 372 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 UBAP1Q9NZ09 502 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 GULP1Q9UBP9 304 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 DKK4Q9UBT3 224 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 SATB2Q9UPW6 733 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 ARL2BPQ9Y2Y0 163 aa5.79□□□□□ -1.48
CNOT9-207ENST00000489687 ZFC3H1O60293 1989 aaKnown RBP5.78□□□□□ -1.48
CNOT9-207ENST00000489687 SCN8AQ9UQD0 1980 aa5.78□□□□□ -1.48
CNOT9-207ENST00000489687 TSPAN11A1L157 253 aa5.78□□□□□ -1.48
CNOT9-207ENST00000489687 SH3PXD2BA1X283 911 aa5.78□□□□□ -1.48
CNOT9-207ENST00000489687 TMEM202A6NGA9 273 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms