RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 MLXIPLQ9NP71 852 aa13.98□□□□□ -0.17
VPS26A-205ENST00000489656 GALPQ9UBC7 116 aa13.98□□□□□ -0.17
VPS26A-205ENST00000489656 RUVBL2Q9Y230 463 aaKnown RBP13.98□□□□□ -0.17
VPS26A-205ENST00000489656 TBC1D3DA0A087WVF3 549 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TBC1D3IA0A087WXS9 549 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TBC1D3EA0A087X179 549 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TBC1D3KA0A087X1G2 549 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TBC1D3FA6NER0 549 aaPredicted RBP13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TARM1B6A8C7 271 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TBC1D3LB9A6J9 549 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 EIF3FO00303 357 aaPredicted RBP13.97□□□□□ -0.17
VPS26A-205ENST00000489656 MAGEC1O60732 1142 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 BPGMP07738 259 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TBC1D3HP0C7X1 549 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 CD1DP15813 335 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 CHRM3P20309 590 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 LSP1P33241 339 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TRIM23P36406 574 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 ATP6V0D1P61421 351 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 GNGT1P63211 74 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 PPARDQ03181 441 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TMEM115Q12893 351 aaPredicted RBP13.97□□□□□ -0.17
VPS26A-205ENST00000489656 SGCGQ13326 291 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 CSHL1Q14406 222 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 IRF4Q15306 451 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TECRLQ5HYJ1 363 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TBC1D3GQ6DHY5 549 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TBC1D3CQ6IPX1 549 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 C16orf46Q6P387 395 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 KLC3Q6P597 504 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 PAQR3Q6TCH7 311 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 MAMSTRQ6ZN01 415 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TBC1D3Q8IZP1 549 aaPredicted RBP13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TMEM151AQ8N4L1 468 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 FLCNQ8NFG4 579 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 GDAP1Q8TB36 358 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 RAB3IL1Q8TBN0 382 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 LKAAEAR1Q8TD35 194 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 HIC2Q96JB3 615 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 SLC30A3Q99726 388 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TEX101Q9BY14 249 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 TRIM39Q9HCM9 518 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 CD320Q9NPF0 282 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 CD93Q9NPY3 652 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 SPATS2LQ9NUQ6 558 aaKnown RBP13.97□□□□□ -0.17
VPS26A-205ENST00000489656 C2orf42Q9NWW7 574 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 SIRPGQ9P1W8 387 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 NCOR1O75376 2440 aa13.97□□□□□ -0.17
VPS26A-205ENST00000489656 IQCF5A8MTL0 148 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 KPNA5O15131 536 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 VEGFDO43915 354 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 DNAJC6O75061 913 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 ZNF217O75362 1048 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 APBB3O95704 486 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 TSPAN12O95859 305 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 FTH1P02794 183 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 RBP1P09455 135 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 GSTM1P09488 218 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 CBSLP0DN79 551 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 ACSL1P33121 698 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 CBSP35520 551 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 PRLHRP49683 370 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 IL2P60568 153 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 PPP2CBP62714 309 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 PPP2CAP67775 309 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 GSTM4Q03013 218 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 GBX1Q14549 363 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 TTLL9Q3SXZ7 439 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 BCL7AQ4VC05 210 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 TTC19Q6DKK2 380 aaPredicted RBP13.96□□□□□ -0.17
VPS26A-205ENST00000489656 ANO7Q6IWH7 933 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 FAM124AQ86V42 546 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 TRIM42Q8IWZ5 723 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 FSTL5Q8N475 847 aaPredicted RBP13.96□□□□□ -0.17
VPS26A-205ENST00000489656 CAMKK1Q8N5S9 505 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 ZBTB2Q8N680 514 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 RASGEF1AQ8N9B8 481 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 SIDT2Q8NBJ9 832 aaKnown RBP13.96□□□□□ -0.17
VPS26A-205ENST00000489656 PLA2G15Q8NCC3 412 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 RHEBL1Q8TAI7 183 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 ZNF514Q96K75 400 aaPredicted RBP13.96□□□□□ -0.17
VPS26A-205ENST00000489656 PAIP2Q9BPZ3 127 aaKnown RBP13.96□□□□□ -0.17
VPS26A-205ENST00000489656 MRPL46Q9H2W6 279 aaKnown RBP13.96□□□□□ -0.17
VPS26A-205ENST00000489656 TFB2MQ9H5Q4 396 aaKnown RBP13.96□□□□□ -0.17
VPS26A-205ENST00000489656 COPG2Q9UBF2 871 aa13.96□□□□□ -0.17
VPS26A-205ENST00000489656 TECTAO75443 2155 aa13.96□□□□□ -0.18
VPS26A-205ENST00000489656 GPR89AB7ZAQ6 455 aa13.95□□□□□ -0.18
VPS26A-205ENST00000489656 G3V2L1 256 aa13.95□□□□□ -0.18
VPS26A-205ENST00000489656 KLF11O14901 512 aa13.95□□□□□ -0.18
VPS26A-205ENST00000489656 INPP4BO15327 924 aa13.95□□□□□ -0.18
VPS26A-205ENST00000489656 LATO43561 262 aa13.95□□□□□ -0.18
VPS26A-205ENST00000489656 RRP9O43818 475 aaKnown RBP13.95□□□□□ -0.18
VPS26A-205ENST00000489656 TRIM16O95361 564 aa13.95□□□□□ -0.18
VPS26A-205ENST00000489656 SEMA4FO95754 770 aa13.95□□□□□ -0.18
VPS26A-205ENST00000489656 PAK4O96013 591 aaPredicted RBP13.95□□□□□ -0.18
VPS26A-205ENST00000489656 PCCBP05166 539 aa13.95□□□□□ -0.18
VPS26A-205ENST00000489656 HOXC4P09017 264 aaPredicted RBP13.95□□□□□ -0.18
VPS26A-205ENST00000489656 SBK3P0C264 359 aa13.95□□□□□ -0.18
VPS26A-205ENST00000489656 GPR89BP0CG08 455 aa13.95□□□□□ -0.18
VPS26A-205ENST00000489656 DGKAP23743 735 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms