RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 POT1Q9NUX5 634 aa14.69□□□□□ -0.06
UFD1-209ENST00000489406 OR52A4PA6NMU1 304 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 P4HA2O15460 535 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 SLC19A2O60779 497 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 PYGLP06737 847 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 CTPS1P17812 591 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 MST1P26927 711 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 KRT9P35527 623 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 FOLR3P41439 243 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 FOXL2P58012 376 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 NSUN2Q08J23 767 aaKnown RBP eCLIP14.68□□□□□ -0.06
UFD1-209ENST00000489406 C15orf59Q2T9L4 293 aaPredicted RBP14.68□□□□□ -0.06
UFD1-209ENST00000489406 C2CD6Q53TS8 623 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 TMTC4Q5T4D3 741 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 LINC00696Q6ZRV3 163 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 UMODL1-AS1Q8N2C9 162 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 PYROXD2Q8N2H3 581 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 CCDC185Q8N715 623 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 EMC1Q8N766 993 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 C18orf8Q96DM3 657 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 C18orf12Q96KH6 178 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 TRIM56Q9BRZ2 755 aaKnown RBP14.68□□□□□ -0.06
UFD1-209ENST00000489406 RMI1Q9H9A7 625 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 GPAMQ9HCL2 828 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 CNOT6Q9ULM6 557 aaKnown RBP14.68□□□□□ -0.06
UFD1-209ENST00000489406 DOCK10Q96BY6 2186 aa14.68□□□□□ -0.06
UFD1-209ENST00000489406 SEC16AO15027 2179 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 CCDC88CQ9P219 2028 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 TLCD2A6NGC4 264 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 K7ELQ4 463 aaPredicted RBP14.67□□□□□ -0.06
UFD1-209ENST00000489406 AGXTP21549 392 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 PCSK6P29122 969 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 SCNN1AP37088 669 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 CLCNKAP51800 687 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 PMS1P54277 932 aaKnown RBP14.67□□□□□ -0.06
UFD1-209ENST00000489406 AP1S1P61966 158 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 IRAK1BP1Q5VVH5 260 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 GJB7Q6PEY0 223 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 FBXO38Q6PIJ6 1188 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 NLRP8Q86W28 1048 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 TMEM151BQ8IW70 566 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 EPS8L1Q8TE68 723 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 SPOCK2Q92563 424 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 CXorf40BQ96DE9 158 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 SCRN2Q96FV2 425 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 ZNF559Q9BR84 538 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 TLR10Q9BXR5 811 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 SLC7A5P2Q9GIP4 190 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 SOHLH2Q9NX45 425 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 TMEM59LQ9UK28 342 aa14.67□□□□□ -0.06
UFD1-209ENST00000489406 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.66□□□□□ -0.06
UFD1-209ENST00000489406 A0A1B0GVL5 298 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 A0A1W2PQ67 120 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 HTRA2O43464 458 aaPredicted RBP14.66□□□□□ -0.06
UFD1-209ENST00000489406 NUAK1O60285 661 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 ZBTB11O95625 1053 aaPredicted RBP14.66□□□□□ -0.06
UFD1-209ENST00000489406 HEXAP06865 529 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 BRAFP15056 766 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 CYP2A7P20853 494 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 RPL10P27635 214 aaKnown RBP14.66□□□□□ -0.06
UFD1-209ENST00000489406 GABRB2P47870 512 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 DSG2Q14126 1118 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 PLA2G4EQ3MJ16 856 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 FOXD4L6Q3SYB3 417 aaPredicted RBP14.66□□□□□ -0.06
UFD1-209ENST00000489406 PRAMEF13Q5VWM6 474 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 LRRC66Q68CR7 880 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 FOXD4L3Q6VB84 417 aaPredicted RBP14.66□□□□□ -0.06
UFD1-209ENST00000489406 TRIM72Q6ZMU5 477 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 B4GALNT4Q76KP1 1039 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 RBM12BQ8IXT5 1001 aaKnown RBP14.66□□□□□ -0.06
UFD1-209ENST00000489406 OR1L3Q8NH93 324 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 CELF6Q96J87 481 aaKnown RBP14.66□□□□□ -0.06
UFD1-209ENST00000489406 SMIM14Q96QK8 99 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 DPH2Q9BQC3 489 aaPredicted RBP14.66□□□□□ -0.06
UFD1-209ENST00000489406 LIME1Q9H400 295 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 LRRC19Q9H756 370 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 FANCEQ9HB96 536 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 SLC6A20Q9NP91 592 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 SLC23A2Q9UGH3 650 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 DNAJC16Q9Y2G8 782 aa14.66□□□□□ -0.06
UFD1-209ENST00000489406 AGPSO00116 658 aa14.65□□□□□ -0.06
UFD1-209ENST00000489406 INHBBP09529 407 aa14.65□□□□□ -0.06
UFD1-209ENST00000489406 PRCPP42785 496 aa14.65□□□□□ -0.06
UFD1-209ENST00000489406 PAPOLAP51003 745 aaKnown RBP14.65□□□□□ -0.06
UFD1-209ENST00000489406 PTSQ03393 145 aa14.65□□□□□ -0.06
UFD1-209ENST00000489406 CCDC40Q4G0X9 1142 aa14.65□□□□□ -0.06
UFD1-209ENST00000489406 KLHL35Q6PF15 583 aa14.65□□□□□ -0.06
UFD1-209ENST00000489406 CA5BP1Q8WTZ4 195 aa14.65□□□□□ -0.06
UFD1-209ENST00000489406 PTERQ96BW5 349 aa14.65□□□□□ -0.06
UFD1-209ENST00000489406 MCCC1Q96RQ3 725 aaPredicted RBP14.65□□□□□ -0.06
UFD1-209ENST00000489406 CD180Q99467 661 aa14.65□□□□□ -0.06
UFD1-209ENST00000489406 CARD9Q9H257 536 aa14.65□□□□□ -0.06
UFD1-209ENST00000489406 ARFGAP3Q9NP61 516 aa14.65□□□□□ -0.06
UFD1-209ENST00000489406 ATXN10Q9UBB4 475 aa14.65□□□□□ -0.06
UFD1-209ENST00000489406 TRIM10Q9UDY6 481 aa14.65□□□□□ -0.06
UFD1-209ENST00000489406 GPN3Q9UHW5 284 aaPredicted RBP14.65□□□□□ -0.06
UFD1-209ENST00000489406 ST6GALNAC2Q9UJ37 374 aa14.65□□□□□ -0.06
UFD1-209ENST00000489406 MEMO1Q9Y316 297 aa14.65□□□□□ -0.06
UFD1-209ENST00000489406 MXRA5Q9NR99 2828 aa14.64□□□□□ -0.07
UFD1-209ENST00000489406 SOCS5O75159 536 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms