RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 COPS4Q9BT78 406 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 C11orf16Q9NQ32 467 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 TESMINQ9Y4I5 508 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 FAM240BA0A1B0GVZ2 78 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 STBD1O95210 358 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 ITGA3P26006 1051 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 CDH5P33151 784 aaPredicted RBP17.46■□□□□ 0.39
NPHP4-209ENST00000489180 CTNNB1P35222 781 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 ACSBG2Q5FVE4 666 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 VSTM1Q6UX27 236 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 PRR23CQ6ZRP0 262 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 TAC4Q86UU9 113 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 KAT2AQ92830 837 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 DHRS7Q9Y394 339 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 ZFP37Q9Y6Q3 630 aaPredicted RBP17.46■□□□□ 0.39
NPHP4-209ENST00000489180 C2CD4BA6NLJ0 364 aa17.46■□□□□ 0.38
NPHP4-209ENST00000489180 MCIDASD6RGH6 385 aa17.46■□□□□ 0.38
NPHP4-209ENST00000489180 PRAMEF1O95521 474 aa17.46■□□□□ 0.38
NPHP4-209ENST00000489180 ANXA4P09525 319 aaPredicted RBP17.46■□□□□ 0.38
NPHP4-209ENST00000489180 MPP5Q8N3R9 675 aa17.46■□□□□ 0.38
NPHP4-209ENST00000489180 C10orf82Q8WW14 230 aa17.46■□□□□ 0.38
NPHP4-209ENST00000489180 PHF12Q96QT6 1004 aa17.46■□□□□ 0.38
NPHP4-209ENST00000489180 C3orf14Q9HBI5 128 aa17.46■□□□□ 0.38
NPHP4-209ENST00000489180 NUDT4Q9NZJ9 180 aa17.46■□□□□ 0.38
NPHP4-209ENST00000489180 ADAMTS3O15072 1205 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 PCDH1Q08174 1060 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 SULT1C3Q6IMI6 304 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 ZNF433Q8N7K0 673 aaPredicted RBP17.45■□□□□ 0.38
NPHP4-209ENST00000489180 PCDH19Q8TAB3 1148 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 RIMS1Q86UR5 1692 aaKnown RBP17.45■□□□□ 0.38
NPHP4-209ENST00000489180 LMO2P25791 158 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 RPIAP49247 311 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 PPP2R2BQ00005 443 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 OR7D4Q8NG98 312 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 HM13Q8TCT9 377 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 TTLL2Q9BWV7 592 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 FZD10Q9ULW2 581 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 SMIM35A0A1B0GVV1 85 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 TPST2O60704 377 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 TCF4P15884 667 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 NRLP54845 237 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 CDH12P55289 794 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 MTPNP58546 118 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 RBBP4Q09028 425 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 PLET1Q6UQ28 207 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 RBM23Q86U06 439 aaKnown RBP17.45■□□□□ 0.38
NPHP4-209ENST00000489180 P2RY8Q86VZ1 359 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 C11orf24Q96F05 449 aaPredicted RBP17.45■□□□□ 0.38
NPHP4-209ENST00000489180 CEP295NLQ96MC4 621 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 TTPALQ9BTX7 342 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 FTHL17Q9BXU8 183 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 PCDHAC1Q9H158 963 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 MIR1-1HGQ9H1L0 117 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 IFT80Q9P2H3 777 aaPredicted RBP17.45■□□□□ 0.38
NPHP4-209ENST00000489180 STXBP5LQ9Y2K9 1186 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 IGLV3-22A0A075B6J6 115 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 OR6C75A6NL08 312 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 ENPP3O14638 875 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 TREHO43280 583 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 ENPEPQ07075 957 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 ADGRE1Q14246 886 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 TSTD2Q5T7W7 516 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 IRAK1BP1Q5VVH5 260 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 ERICH5Q6P6B1 374 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 MEIOBQ8N635 442 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 NODALQ96S42 347 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 CNPPD1Q9BV87 410 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 ZNF358Q9NW07 568 aa17.45■□□□□ 0.38
NPHP4-209ENST00000489180 H3BM21 787 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 TMEM63AO94886 807 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 CHRM5P08912 532 aaPredicted RBP17.44■□□□□ 0.38
NPHP4-209ENST00000489180 SAGP10523 405 aaPredicted RBP17.44■□□□□ 0.38
NPHP4-209ENST00000489180 RHOQP17081 205 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 SPAM1P38567 509 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 RAB43Q86YS6 212 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 ADAMTS15Q8TE58 950 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 AP2M1Q96CW1 435 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 PCED1BQ96HM7 432 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 TAS2R1Q9NYW7 299 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 TCRBV7S3A2A0A539 114 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 STX16-NPEPL1H3BU86 382 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 STX16O14662 325 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 MATN3O15232 486 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 BRINP2Q9C0B6 783 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 C8orf4Q9NR00 106 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 FCF1Q9Y324 198 aaKnown RBP17.44■□□□□ 0.38
NPHP4-209ENST00000489180 UGT1A5P35504 534 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 PTPN9P43378 593 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 NEK5Q6P3R8 708 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.44■□□□□ 0.38
NPHP4-209ENST00000489180 MUC13Q9H3R2 512 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 AASDHPPTQ9NRN7 309 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 TRBV23OR9-2A0A075B6M9 112 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 H3BNX3 289 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 AIREO43918 545 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 ITPKBP27987 946 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 CNPY1Q3B7I2 92 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 INTS6LQ5JSJ4 861 aaKnown RBP17.44■□□□□ 0.38
NPHP4-209ENST00000489180 OR8D1Q8WZ84 308 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 POP5Q969H6 163 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms