RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 CNTNAP3BQ96NU0 1288 aa12.69□□□□□ -0.38
PHF1-210ENST00000488767 DPYSL5Q9BPU6 564 aa12.69□□□□□ -0.38
PHF1-210ENST00000488767 CNTNAP3Q9BZ76 1288 aa12.69□□□□□ -0.38
PHF1-210ENST00000488767 NRSN2Q9GZP1 204 aa12.69□□□□□ -0.38
PHF1-210ENST00000488767 FAM96AQ9H5X1 160 aa12.69□□□□□ -0.38
PHF1-210ENST00000488767 XAB2Q9HCS7 855 aaKnown RBP12.69□□□□□ -0.38
PHF1-210ENST00000488767 SARS2Q9NP81 518 aaKnown RBP12.69□□□□□ -0.38
PHF1-210ENST00000488767 KCNK4Q9NYG8 393 aa12.69□□□□□ -0.38
PHF1-210ENST00000488767 SMARCAL1Q9NZC9 954 aa12.69□□□□□ -0.38
PHF1-210ENST00000488767 AKAP7Q9P0M2 348 aaPredicted RBP12.69□□□□□ -0.38
PHF1-210ENST00000488767 ASIC3Q9UHC3 531 aa12.69□□□□□ -0.38
PHF1-210ENST00000488767 TMPRSS11EQ9UL52 423 aa12.69□□□□□ -0.38
PHF1-210ENST00000488767 NEU2Q9Y3R4 380 aa12.69□□□□□ -0.38
PHF1-210ENST00000488767 ACACBO00763 2458 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 TRBV23OR9-2A0A075B6M9 112 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 TRABD2BA6NFA1 517 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 AGAP14A8MT82 685 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 C1QTNF9BB2RNN3 333 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 D6RAR5 112 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 CCDC188H7C350 402 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 PFDN6O15212 129 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 DUX1O43812 170 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 VIPP01282 170 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 GSTM1P09488 218 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 SLC35G4P0C7Q5 338 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 C1QTNF9P0C862 333 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 PAMP19021 973 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 ACRV1P26436 265 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 GRIA1P42261 906 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 CLDN6P56747 220 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 CCL7P80098 99 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 GSTM4Q03013 218 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 ISXQ2M1V0 245 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 AMZ1Q400G9 498 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 BCL7AQ4VC05 210 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 FASTKD1Q53R41 847 aaKnown RBP12.68□□□□□ -0.38
PHF1-210ENST00000488767 AGAP9Q5VTM2 703 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 CASC4Q6P4E1 433 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 SYDE1Q6ZW31 735 aaPredicted RBP12.68□□□□□ -0.38
PHF1-210ENST00000488767 ZNF438Q7Z4V0 828 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 PCGF5Q86SE9 256 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 PIM3Q86V86 326 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 SERPINA9Q86WD7 417 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 ZNF547Q8IVP9 402 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 RBM12BQ8IXT5 1001 aaKnown RBP12.68□□□□□ -0.38
PHF1-210ENST00000488767 LSMEM2Q8N112 164 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 OR4L1Q8NH43 312 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 SLC37A2Q8TED4 501 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 PATE1Q8WXA2 126 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 ZCCHC14Q8WYQ9 949 aaKnown RBP12.68□□□□□ -0.38
PHF1-210ENST00000488767 HDAC10Q969S8 669 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 TRIM44Q96DX7 344 aaPredicted RBP12.68□□□□□ -0.38
PHF1-210ENST00000488767 SGF29Q96ES7 293 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 TSSK1BQ9BXA7 367 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 EPB41L1Q9H4G0 881 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 PRDM8Q9NQV8 689 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 POT1Q9NUX5 634 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 CPNE7Q9UBL6 633 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 PCYOX1Q9UHG3 505 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 ACSL5Q9ULC5 683 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 PCYT1BQ9Y5K3 369 aaPredicted RBP12.68□□□□□ -0.38
PHF1-210ENST00000488767 ST14Q9Y5Y6 855 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 SCN8AQ9UQD0 1980 aa12.68□□□□□ -0.38
PHF1-210ENST00000488767 MAGEB16A2A368 324 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 MGAT4DA6NG13 374 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 NTN3O00634 580 aaPredicted RBP12.67□□□□□ -0.38
PHF1-210ENST00000488767 AP2A2O94973 939 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 CPNE6O95741 557 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 FTH1P02794 183 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 MLNP12872 115 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 RPL10P27635 214 aaKnown RBP12.67□□□□□ -0.38
PHF1-210ENST00000488767 NSG1P42857 185 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 CTSCP53634 463 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 DRG2P55039 364 aaKnown RBP12.67□□□□□ -0.38
PHF1-210ENST00000488767 INHBCP55103 352 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 DMPKQ09013 629 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 EIF3IQ13347 325 aaKnown RBP12.67□□□□□ -0.38
PHF1-210ENST00000488767 ITIH4Q14624 930 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 KCNJ11Q14654 390 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 NR1D2Q14995 579 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 WASH2PQ6VEQ5 465 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 SFTPA2Q8IWL1 248 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 PPIL6Q8IXY8 311 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 OTUD6BQ8N6M0 293 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 OR2L2Q8NH16 312 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 TMEM159Q96B96 161 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 DDX47Q9H0S4 455 aaKnown RBP12.67□□□□□ -0.38
PHF1-210ENST00000488767 EPB41L5Q9HCM4 733 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 WASH6PQ9NQA3 447 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 CHRAC1Q9NRG0 131 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 SLC23A2Q9UGH3 650 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 RABGEF1Q9UJ41 708 aa12.67□□□□□ -0.38
PHF1-210ENST00000488767 TRBV5-4A0A0C4DH59 114 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 CCDC162PA2VCL2 907 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 A6NCN8 305 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 NDC80O14777 642 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 GOT2P00505 430 aaKnown RBP12.66□□□□□ -0.38
PHF1-210ENST00000488767 OR56A5P0C7T3 313 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 XRCC1P18887 633 aaPredicted RBP12.66□□□□□ -0.38
PHF1-210ENST00000488767 MGAT1P26572 445 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms