RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 RAD51Q06609 339 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 IL10RBQ08334 325 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 CCDC15Q0P6D6 951 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 OVGP1Q12889 678 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 TRAF2Q12933 501 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 RALGDSQ12967 914 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 KRT81Q14533 505 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 ZNF460Q14592 562 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 LLGL1Q15334 1064 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 DPYSL2Q16555 572 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 UGP2Q16851 508 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 WSCD2Q2TBF2 565 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 COL28A1Q2UY09 1125 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 TMEM52BQ4KMG9 183 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 CFAP58Q5T655 872 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 GUSBP11Q6P575 273 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 ALKBH5Q6P6C2 394 aaKnown RBP5.92□□□□□ -1.46
CDHR3-213ENST00000488386 ENPP7Q6UWV6 458 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 RFLNAQ6ZTI6 216 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 PARGQ86W56 976 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 LRRC56Q8IYG6 542 aaPredicted RBP5.92□□□□□ -1.46
CDHR3-213ENST00000488386 OR4C6Q8NH72 309 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 ZNF564Q8TBZ8 553 aaPredicted RBP5.92□□□□□ -1.46
CDHR3-213ENST00000488386 FNIP1Q8TF40 1166 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 FBXW5Q969U6 566 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 DACT3Q96B18 629 aaPredicted RBP5.92□□□□□ -1.46
CDHR3-213ENST00000488386 PDXPQ96GD0 296 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 LRIG1Q96JA1 1093 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 CSPG4P5Q96PW8 444 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 CHP1Q99653 195 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 LRRC61Q9BV99 259 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 EDEM3Q9BZQ6 932 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 CLPBQ9H078 707 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 SYNDIG1Q9H7V2 258 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 SMURF1Q9HCE7 757 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 MRPL47Q9HD33 250 aaKnown RBP5.92□□□□□ -1.46
CDHR3-213ENST00000488386 SPTLC3Q9NUV7 552 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 TMEM51Q9NW97 253 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 DTLQ9NZJ0 730 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 CTTNBP2NLQ9P2B4 639 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 APOBEC3BQ9UH17 382 aaKnown RBP5.92□□□□□ -1.46
CDHR3-213ENST00000488386 NENFQ9UMX5 172 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 TFR2Q9UP52 801 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 LUC7L2Q9Y383 392 aaKnown RBP5.92□□□□□ -1.46
CDHR3-213ENST00000488386 HYOU1Q9Y4L1 999 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 HS3ST3A1Q9Y663 406 aa5.92□□□□□ -1.46
CDHR3-213ENST00000488386 EPG5Q9HCE0 2579 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 FREM2Q5SZK8 3169 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 TSPAN11A1L157 253 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 GOLGA6CA6NDK9 693 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 GOLGA6BA6NDN3 693 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 TMEM8BA6NDV4 472 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 ZNF561-AS1K7EIQ3 104 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 TRAFD1O14545 582 aaPredicted RBP5.91□□□□□ -1.46
CDHR3-213ENST00000488386 AQP9O43315 295 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 NUAK1O60285 661 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 MAFKO60675 156 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 RECQL5O94762 991 aaPredicted RBP5.91□□□□□ -1.46
CDHR3-213ENST00000488386 MT-CO3P00414 261 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 CSF2P04141 144 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 ALPIP09923 528 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 GOLGA6DP0CG33 693 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 TSHRP16473 764 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 TGM2P21980 687 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 ACP1P24666 158 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 ITPKBP27987 946 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 SERPINA4P29622 427 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 PCK1P35558 622 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 MMP12P39900 470 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 RABIFP47224 123 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 ARSEP51690 589 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 THOP1P52888 689 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 BCL2L1Q07817 233 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 ITKQ08881 620 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 DPYSL3Q14195 570 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 ZNF235Q14590 738 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 IHHQ14623 411 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 MESDQ14696 234 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 ALG11Q2TAA5 492 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 ZFYVE27Q5T4F4 411 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 FAXCQ5TGI0 409 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 NCBP2-AS2Q69YL0 99 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 PPP1R2P3Q6NXS1 205 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 TMCO3Q6UWJ1 677 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 EFL1Q7Z2Z2 1120 aaKnown RBP5.91□□□□□ -1.46
CDHR3-213ENST00000488386 TSPAN33Q86UF1 283 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 STK32CQ86UX6 486 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 PTRH1Q86Y79 214 aaKnown RBP5.91□□□□□ -1.46
CDHR3-213ENST00000488386 GALNT15Q8N3T1 639 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 ATPAF2Q8N5M1 289 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 CCL4L1Q8NHW4 92 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 IFI44Q8TCB0 444 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 PHOSPHO1Q8TCT1 267 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 CASKIN2Q8WXE0 1202 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 RAB7BQ96AH8 199 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 NAF1Q96HR8 494 aaKnown RBP5.91□□□□□ -1.46
CDHR3-213ENST00000488386 MAGEB10Q96LZ2 347 aaPredicted RBP5.91□□□□□ -1.46
CDHR3-213ENST00000488386 LENG8Q96PV6 779 aaPredicted RBP5.91□□□□□ -1.46
CDHR3-213ENST00000488386 GORASP1Q9BQQ3 440 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 APOOQ9BUR5 198 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms